Pre_GI: BLASTP Hits

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Query: NC_006905:3717306:3737669 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 3737669, End: 3738025, Length: 357

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013282:551219:553855553855554361507Cronobacter turicensis, complete genomeLysozyme9e-0958.9
NC_005956:1019788:102261610226161023281666Bartonella henselae str. Houston-1, complete genomePhage related lysozyme1e-0858.5
NC_019907:539749:562889562889563371483Liberibacter crescens BT-1 chromosome, complete genomelysozyme1e-0755.5
NC_012846:1147000:115919611591961159861666Bartonella grahamii as4aup, complete genomephage related lysozyme2e-0754.7
NC_012846:986877:102041410204141021076663Bartonella grahamii as4aup, complete genomephage related lysozyme2e-0754.3
NC_010161:1179000:118996111899611190623663Bartonella tribocorum CIP 105476, complete genomephage-related lysozyme4e-0753.5
NC_010161:2235500:223941122394112240073663Bartonella tribocorum CIP 105476, complete genomephage-related lysozyme4e-0753.5
NC_009348:2362163:237503423750342375492459Aeromonas salmonicida subsp. salmonicida A449, complete genomeautolysin9e-0752.4
NC_010067:2529750:2544273254427325473713099Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-0650.8