Pre_GI: BLASTP Hits

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Query: NC_006905:326517:350498 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 350498, End: 351043, Length: 546

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:2536000:2544376254437625454551080Salmonella enterica subsp. enterica serovar Paratyphi A strfimbrial protein3e-44177
NC_006511:2540500:2548840254884025499191080Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative fimbrail protein3e-44177
NC_016832:2612809:2621016262101626220951080Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-43174
NC_003198:331314:3559193559193569981080Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative fimbrail protein3e-43174
NC_004631:2615908:2624115262411526251941080Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative fimbrail protein3e-43174
NC_011083:338910:3545523545523556041053Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative fimbrail protein2e-38158