Pre_GI: BLASTP Hits

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Query: NC_006905:2630000:2639408 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 2639408, End: 2639722, Length: 315

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009778:1717458:172021417202141720528315Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-37154
NC_020064:521500:527914527914528264351Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF1493)5e-1166.2
NC_013282:923500:935959935959936309351Cronobacter turicensis, complete genomehypothetical protein3e-1063.9
NC_010634:2004653:201516020151602015486327Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein1e-0858.5
NC_020064:1409596:141618114161811416549369Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF1493)2e-0858.2
NC_020260:3355814:337473733747373375063327Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-0857.8
NC_020064:3157656:317040931704093170702294Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF1493)7e-0855.8
NC_020260:603796:609015609015609362348Cronobacter sakazakii Sp291, complete genomehypothetical protein8e-0855.8
NC_013282:551219:576480576480576722243Cronobacter turicensis, complete genomehypothetical protein8e-0855.8
NC_020260:3004500:301276730127673013096330Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-0755.1
NC_009778:567000:572439572439572786348Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0754.7
NC_014839:170000:177686177686178003318Pantoea sp. At-9b plasmid pPAT9B02, complete sequencehypothetical protein3e-0753.5
NC_010694:614985:636011636011636307297Erwinia tasmaniensis, complete genomePutative acyl carrier protein1e-0652
NC_011094:1584038:159512715951271595459333Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-0652
NC_016818:3986570:399427739942773994591315Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein2e-0651.6
NC_013956:3525711:353202335320233532322300Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-0651.2
NC_004631:948054:953913953913954239327Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-0650.8
NC_011094:2061000:206332720633272063653327Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-0650.4
NC_011294:2053991:209636920963692096695327Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-0650.4
NC_011274:2044000:208750220875022087828327Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-0650.4
NC_011205:2180598:222338222233822223708327Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-0650.4