Pre_GI: BLASTP Hits

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Query: NC_006905:1342474:1359286 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 1359286, End: 1359501, Length: 216

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:2531817:254647125464712546686216Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-2097.8
NC_010102:1779707:179435917943591794586228Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1788.6
NC_016831:1083871:109069310906931090899207Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-1788.6
NC_011205:2024458:203911220391122039318207Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-1788.6
NC_011083:1323827:133270413327041332910207Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-1788.6
NC_011149:1870931:188559618855961885802207Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-1685.5
NC_016863:1277652:128582912858291286032204Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-1581.3
NC_016860:1317174:132535113253511325554204Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-1581.3