Pre_GI: BLASTP Hits

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Query: NC_006663:1:7077 Staphylococcus epidermidis RP62A plasmid pSERP, complete sequence

Start: 7077, End: 7412, Length: 336

Host Lineage: Staphylococcus epidermidis; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a strongly adherent, slime-producing, pathogenic strain isolated from a patient with intravascular catheter-associated sepsis. Common skin bacterium. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is the most prevalent and persistent Staphylococcus species on human skin. S. epidermidis has emerged as a common cause of nosocomial (hospital-acquired) infections, including catheter-associated infections and septicemia, particularly in immunocompromised patients. Staphylococcus epidermidis is highly resistant to many antibiotics including penicillins and cephalosporins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013730:1572889:158489615848961585843948Spirosoma linguale DSM 74, complete genomeHelix-turn-helix type 11 domain protein7e-32135
NC_015321:4287945:429367142936714294360690Fluviicola taffensis DSM 16823 chromosome, complete genomeregulatory protein DeoR2e-28124
NC_010830:1038292:106250910625091063198690Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-27120
NC_015277:3351504:337463733746373375632996Sphingobacterium sp. 21 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein3e-25113
NC_014834:959986:975100975100975783684Rhodopseudomonas palustris DX-1 chromosome, complete genomeDeoR family transcriptional regulator3e-1787
NC_013406:7024149:705119870511987051689492Paenibacillus sp. Y412MC10 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein4e-1786.7
NC_012914:336750:336750336750337697948Paenibacillus sp. JDR-2, complete genomeHelix-turn-helix type 11 domain protein7e-1785.9
NC_014117:442616:508243508243508986744Burkholderia sp. CCGE1002 chromosome chromosome 1, completeHelix-turn-helix type 11 domain protein8e-1682.4
NC_008702:3375027:338766433876643388353690Azoarcus sp. BH72, complete genomeputative transcriptional regulator, deoR-family1e-1478.6
NC_008752:261903:277097277097277780684Acidovorax avenae subsp. citrulli AAC00-1, complete genomeHelix-turn-helix, type 11 domain protein2e-1477.8
NC_007645:2049988:206178620617862062526741Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator5e-1269.7
NC_013283:113660:649164917147657Cronobacter turicensis plasmid pCTU1, complete sequencehypothetical protein7e-1269.3
NC_015856:3536441:354052335405233541248726Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein3e-1167.4
NC_014963:4872883:487407348740734874783711Terriglobus saanensis SP1PR4 chromosome, complete genomehypothetical protein5e-1166.6
NC_015663:3742738:374273837427383743427690Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-1166.6
NC_018515:3108755:311124831112483112186939Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator2e-1064.3
NC_009348:2247500:224951722495172250233717Aeromonas salmonicida subsp. salmonicida A449, complete genomeDeoR family transriptional regulator3e-1063.9
NC_015690:8614000:862124486212448622191948Paenibacillus mucilaginosus KNP414 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein6e-1062.8
NC_014551:2510000:253795525379552538917963Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein1e-0962
NC_015690:4469775:454444845444484545389942Paenibacillus mucilaginosus KNP414 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein3e-0960.8
NC_016935:4233223:430075343007534301694942Paenibacillus mucilaginosus 3016 chromosome, complete genomehelix-turn-helix type 11 domain-containing protein3e-0960.5
NC_015172:1161000:118132511813251182239915Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein6e-0959.7
CP002207:1538782:157149115714911572453963Bacillus atrophaeus 1942, complete genomeDeoR family transcriptional regulator5e-0959.7
NC_014639:1538782:157149115714911572453963Bacillus atrophaeus 1942 chromosome, complete genomeDeoR family transcriptional regulator5e-0959.7
NC_013406:4000518:401390540139054014867963Paenibacillus sp. Y412MC10 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein5e-0959.7
NC_021066:1712905:171860317186031719292690Raoultella ornithinolytica B6, complete genomehypothetical protein7e-0959.3
NC_016048:3063888:308369630836963084625930Oscillibacter valericigenes Sjm18-20, complete genomeputative DeoR family transcriptional regulator7e-0959.3
NC_015500:1236874:124977012497701250702933Treponema brennaborense DSM 12168 chromosome, complete genomehypothetical protein9e-0958.9
NC_015690:790500:798606798606799568963Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator DeoR8e-0958.9
NC_016935:789849:798132798132799094963Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator DeoR8e-0958.9
NC_016935:1868839:189117718911771892094918Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein2e-0857.8
NC_015589:38418:620836208363015933Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeDeoR family transcriptional regulator2e-0857.4
NC_016630:864601:901843901843902787945Filifactor alocis ATCC 35896 chromosome, complete genomeDeoR family transcriptional regulator3e-0857.4
NC_015690:1348691:136749213674921368409918Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein3e-0857.4
NC_013517:2413373:242886424288642429832969Sebaldella termitidis ATCC 33386, complete genomeHelix-turn-helix type 11 domain protein3e-0857
NC_012470:1390285:141421814142181415117900Streptococcus equi subsp. zooepidemicus, complete genomeDNA-bind protein5e-0856.6
UCMB5137:1594000:161226716122671613205939Bacillus atrophaeus UCMB-5137putative transcriptional regulator6e-0856.2
NC_009380:4702815:470281547028154703813999Salinispora tropica CNB-440 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein8e-0855.8
NC_011886:2097349:211493021149302115628699Arthrobacter chlorophenolicus A6, complete genomeHelix-turn-helix type 11 domain protein1e-0755.5
NC_003454:1889529:190538719053871906331945Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeTranscriptional regulator, DeoR family1e-0755.5
NC_015172:1195782:122718012271801228112933Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehypothetical protein1e-0755.5
NC_014551:3864127:386884838688483869810963Bacillus amyloliquefaciens DSM 7, complete genometranscriptional regulator, DeoR family1e-0755.1
NC_017190:3879148:388386938838693884831963Bacillus amyloliquefaciens LL3 chromosome, complete genomeDeoR family transcriptional regulator1e-0755.1
NC_016641:2225779:223185222318522232790939Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator2e-0754.3
NC_017986:5421000:543011354301135430412300Pseudomonas putida ND6 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein3e-0753.9
NC_009512:3118907:312573231257323126031300Pseudomonas putida F1, complete genomeHelix-turn-helix, type 11 domain protein3e-0753.9
NC_016641:5808113:582551958255195826481963Paenibacillus terrae HPL-003 chromosome, complete genomeDeoR family transcriptional regulator3e-0753.9
NC_015733:4130000:413800741380074138693687Pseudomonas putida S16 chromosome, complete genomeDeoR family transcriptional regulator3e-0753.9
NC_009633:3933941:393600439360043936351348Alkaliphilus metalliredigens QYMF chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein4e-0753.5
NC_018866:2484500:249076824907682491700933Dehalobacter sp. DCA chromosome, complete genomeTranscriptional regulator, DeoR family3e-0753.5
NC_014622:653599:659449659449660381933Paenibacillus polymyxa SC2 chromosome, complete genomeDeoR family transcriptional regulator7e-0752.8
NC_014483:562594:568580568580569533954Paenibacillus polymyxa E681 chromosome, complete genomePredicted transcriptional regulator1e-0652.4
NC_014976:170683:194551194551195489939Bacillus subtilis BSn5 chromosome, complete genomeputative transcriptional regulator2e-0650.8
NC_020272:2077795:209154620915462092460915Bacillus amyloliquefaciens IT-45, complete genomeHTH-type transcriptional regulator YobV3e-0650.8