Pre_GI: BLASTP Hits

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Query: NC_006512:1942000:1956272 Idiomarina loihiensis L2TR, complete genome

Start: 1956272, End: 1956817, Length: 546

Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009092:2529518:253625025362502536765516Shewanella loihica PV-4, complete genomeDisulphide bond formation protein DsbB6e-24110
NC_014500:2525880:254457025445702545100531Dickeya dadantii 3937 chromosome, complete genomeoxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I6e-24110
NC_011601:1315746:133906813390681339598531Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomedisulfide bond formation protein B1e-23108
NC_011745:1287714:131233113123311312861531Escherichia coli ED1a chromosome, complete genomedisulfide bond formation protein B2e-23108
NC_020181:734477:745653745653746132480Enterobacter aerogenes EA1509E, complete genomePeriplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation1e-22105
NC_015663:4735808:474003047400304740560531Enterobacter aerogenes KCTC 2190 chromosome, complete genomedisulfide bond formation protein B2e-22105
NC_020211:2985157:299872429987242999254531Serratia marcescens WW4, complete genomeoxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I3e-22104
NC_013282:2582720:258856725885672589100534Cronobacter turicensis, complete genomeDisulfide bond formation protein B7e-1993.6
NC_004347:4007847:401637740163774017015639Shewanella oneidensis MR-1, complete genomedisulfide bond formation protein4e-1064.3
NC_015731:3077842:308105130810513081524474Nitrosomonas sp. Is79A3 chromosome, complete genomeDisulfide bond formation protein B1e-0859.3
NC_015222:2683056:268305626830562683574519Nitrosomonas sp. AL212 chromosome, complete genomedisulfide bond formation protein DsbB4e-0857.4
NC_015276:632206:632206632206632700495Marinomonas mediterranea MMB-1 chromosome, complete genomeDisulfide bond formation protein B2e-0755.1