Pre_GI: BLASTP Hits

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Query: NC_006361:1665378:1705599 Nocardia farcinica IFM 10152, complete genome

Start: 1705599, End: 1706774, Length: 1176

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014165:3559305:3568184356818435694041221Thermobispora bispora DSM 43833 chromosome, complete genomeXRE family transcriptional regulator3e-25116
NC_008278:6854759:6862282686228268635111230Frankia alni ACN14a, complete genomehypothetical protein1e-23111
NC_007777:4954306:4959583495958349607941212Frankia sp. CcI3, complete genometranscriptional regulator, XRE family2e-23110
NC_014666:300571:3146723146723159311260Frankia sp. EuI1c chromosome, complete genomehelix-turn-helix domain protein1e-21104
NC_013093:1213908:1225890122589012271011212Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, XRE family1e-1687.8
NC_009921:1813500:1832504183250418337151212Frankia sp. EAN1pec, complete genometranscriptional regulator, XRE family6e-1375.5
NC_015953:3456535:3480274348027434815031230Streptomyces sp. SirexAA-E chromosome, complete genomeXRE family transcriptional regulator2e-0963.9
NC_019673:7400817:7404248740424874056121365Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein4e-0859.7
NC_009953:2808288:2821875282187528234491575Salinispora arenicola CNS-205 chromosome, complete genomeXRE family transcriptional regulator6e-0858.9
NC_013510:4960500:4969443496944349706451203Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family1e-0757.8
NC_016582:7101701:7113309711330971145141206Streptomyces bingchenggensis BCW-1 chromosome, complete genomeXRE family transcriptional regulator7e-0755.5
NC_013929:2375613:244642124464212446972552Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-0654.7
NC_015656:3300747:3311639331163933128621224Frankia symbiont of Datisca glomerata chromosome, complete genomehelix-turn-helix domain-containing protein3e-0653.5
NC_016111:2402891:2408521240852124098251305Streptomyces cattleya NRRL 8057, complete genomeHelix-turn-helix protein5e-0652.8