Pre_GI: BLASTP Hits

Some Help

Query: NC_006177:1060428:1067931 Symbiobacterium thermophilum IAM 14863, complete genome

Start: 1067931, End: 1068233, Length: 303

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016641:373623:386847386847387170324Paenibacillus terrae HPL-003 chromosome, complete genomePTS system lichenan-specific transporter subunit IIB5e-1993.2
NC_016641:2291363:230539123053912305717327Paenibacillus terrae HPL-003 chromosome, complete genomePTS system lactose/cellobiose-specific transporter subunit IIB7e-1992.4
NC_014219:192555:196401196401196712312Bacillus selenitireducens MLS10 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit6e-1682.8
NC_014376:6296:111851118511490306Clostridium saccharolyticum WM1 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit2e-1477.8
NC_020291:5409587:542631754263175426616300Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephosphotransferase system cellobiose-specific component IIB7e-1475.9
NC_003210:2749538:275760627576062757911306Listeria monocytogenes EGD-e, complete genomehypothetical protein4e-1373.2
NC_013891:2643085:265318026531802653485306Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomePTS system, beta-glucoside-specific, IIB component6e-1372.8
NC_002973:2701983:271090327109032711208306Listeria monocytogenes str. 4b F2365, complete genomePTS system, beta-glucoside-specific, IIB component1e-1271.6
NC_011660:2839201:285040128504012850706306Listeria monocytogenes HCC23 chromosome, complete genomePTS system lichenan-specific transporter subunit IIB1e-1271.6
NC_012488:2719955:272887527288752729180306Listeria monocytogenes Clip81459, complete genomecellobiose phosphotransferase enzyme IIB component1e-1271.6
NC_013768:171889:183986183986184291306Listeria monocytogenes 08-5923, complete genomehypothetical protein2e-1271.2
NC_013766:171889:183986183986184291306Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein2e-1271.2
NC_003212:2837366:284754828475482847853306Listeria innocua Clip11262, complete genomehypothetical protein2e-1271.2
NC_019978:2532640:255213725521372552451315Halobacteroides halobius DSM 5150, complete genomephosphotransferase system cellobiose-specific component IIB1e-1168.6
NC_008261:2743942:276488027648802765209330Clostridium perfringens ATCC 13124, complete genomePTS system, lactose/cellobiose-specific IIB component4e-1166.6
NC_015389:114469:122668122668122979312Coriobacterium glomerans PW2 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit6e-1166.2
NC_014377:1985714:199726619972661997592327Thermosediminibacter oceani DSM 16646 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit9e-1165.5
NC_008800:4488112:449114944911494491463315Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,pts system, cellobiose-specific IIB component3e-1063.5
NC_010582:1771591:177329017732901773607318Streptococcus pneumoniae CGSP14, complete genomePTS system, IIB component3e-1063.5
NC_016845:2781438:278784727878472788170324Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,lactose/cellobiose-specific PTS family enzyme IIB component4e-1063.5
NC_012731:2739964:274637427463742746697324Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomelactose/cellobiose-specific PTS family enzyme IIB component4e-1063.5
NC_012912:844339:850144850144850461318Dickeya zeae Ech1591, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit1e-0961.6
NC_008262:2824503:283714728371472837449303Clostridium perfringens SM101, complete genomePTS system, IIB component2e-0961.2
NC_016605:132253:137529137529137843315Pediococcus claussenii ATCC BAA-344 chromosome, complete genomePTS system, Lactose/Cellobiose specific IIB subunit8e-0958.9
NC_014377:321949:337203337203337511309Thermosediminibacter oceani DSM 16646 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit9e-0958.9
NC_020181:1344259:134559613455961345907312Enterobacter aerogenes EA1509E, complete genomePTS system, cellobiose-specific IIB component3e-0857.4
NC_020995:3252500:325769332576933258004312Enterococcus casseliflavus EC20, complete genomehypothetical protein1e-0755.1
NC_013716:4306695:434691043469104347224315Citrobacter rodentium ICC168, complete genomePTS system, cellobiose-specific IIb component5e-0753.1
NC_009778:259241:260583260583260897315Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-0752.8
NC_013282:3719500:373649737364973736811315Cronobacter turicensis, complete genomeCellobiose-specific phosphotransferase enzyme IIB component6e-0752.8
NC_020260:263528:264870264870265184315Cronobacter sakazakii Sp291, complete genomecellobiose-specific phosphotransferase enzyme IIB component6e-0752.8
NC_013203:1406158:140751414075141407828315Atopobium parvulum DSM 20469, complete genomephosphotransferase system lactose/cellobiose- specific IIB subunit7e-0752.8
NC_012912:1200000:121510112151011215406306Dickeya zeae Ech1591, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit6e-0649.7