Pre_GI: BLASTP Hits

Some Help

Query: NC_006155:3846315:3860127 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 3860127, End: 3860465, Length: 339

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009708:853063:859673859673860011339Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein6e-60228
NC_010634:3762532:377318337731833773506324Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein4e-59226
NC_010465:868402:878936878936879259324Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein1e-57221
NC_009831:3092126:310734531073453107677333Shewanella sediminis HAW-EB3, complete genomehypothetical protein3e-1890.5
NC_013062:627000:654636654636655235600Flavobacteriaceae bacterium 3519-10, complete genomehypothetical protein1e-1788.2
NC_013016:1801000:181002418100241810377354Neisseria meningitidis alpha14 chromosome, complete genomehypothetical protein4e-1786.7
NC_013016:571255:582586582586582939354Neisseria meningitidis alpha14 chromosome, complete genomehypothetical protein4e-1786.7
NC_017501:1680075:168947516894751689828354Neisseria meningitidis 8013, complete genomehypothetical protein5e-1683.2
NC_002946:1342857:135290913529091353262354Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein4e-1683.2
NC_011035:1348659:136188613618861362239354Neisseria gonorrhoeae NCCP11945 chromosome, complete genomehypothetical protein4e-1683.2
NC_017511:1257663:127055712705571270910354Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomehypothetical protein4e-1683.2
NC_017512:1824966:183334718333471833700354Neisseria meningitidis WUE 2594, complete genomehypothetical protein4e-1683.2
NC_017514:1885154:189095518909551891308354Neisseria meningitidis M01-240149 chromosome, complete genomehypothetical protein4e-1683.2
NC_017515:372487:383214383214383567354Neisseria meningitidis M04-240196 chromosome, complete genomehypothetical protein4e-1683.2
NC_017518:2041282:204518420451842045537354Neisseria meningitidis NZ-05/33 chromosome, complete genomehypothetical protein4e-1683.2
NC_008027:558507:569657569657570001345Pseudomonas entomophila L48, complete genomehypothetical protein1e-1478.6
NC_008027:4889662:489985848998584900292435Pseudomonas entomophila L48, complete genomehypothetical protein3e-1373.9
NC_020126:6190662:619840161984016198757357Myxococcus stipitatus DSM 14675, complete genomehypothetical protein3e-1373.6
NC_003295:3421520:344487734448773445245369Ralstonia solanacearum GMI1000, complete genomehypothetical protein1e-1272
NC_014310:1900653:190832219083221908690369Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein3e-1270.9