Pre_GI: BLASTP Hits

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Query: NC_005244:37546:47815 Pseudomonas sp. ND6 plasmid pND6-1, complete sequence

Start: 47815, End: 48534, Length: 720

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. In the latter form the single cell can display an extremely high motility due to its polar flagella. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Typically they are plant pathogens, although several strains are pathogenic to humans. These bacteria share a high degree of homology to Pseudomonas aeruginosa strains. However, key virulence factors like certain exotoxin genes and type III secretion systems are absent, which makes these bacteria non-pathogenic in nature. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:3689223:369705736970573697761705Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein2e-1169.3
NC_015556:1899850:190353919035391904231693Pseudomonas fulva 12-X chromosome, complete genomeGCN5-related N-acetyltransferase5e-0961.2
NC_009434:1743696:174683717468371747532696Pseudomonas stutzeri A1501, complete genomeacetyltransferase3e-0755.5
NC_015740:1594376:159770215977021598361660Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeacetyltransferase9e-0753.9
NC_015410:3791500:380721838072183807913696Pseudomonas mendocina NK-01 chromosome, complete genomeacetyltransferase2e-0653.1
NC_010501:2609567:263441226344122635098687Pseudomonas putida W619, complete genomeGCN5-related N-acetyltransferase2e-0652.8