Pre_GI: BLASTP Hits

Some Help

Query: NC_005140:883857:900968 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 900968, End: 901849, Length: 882

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014966:919442:931303931303932184882Vibrio vulnificus MO6-24/O chromosome II, complete sequencecopper-sensing two-component system response regulator CusR6e-171599
NC_013457:140474:145669145669146550882Vibrio sp. Ex25 chromosome 2, complete genomehypothetical protein2e-107389
NC_016628:193000:198409198409199287879Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein1e-86319
NC_012667:839318:860882860882861766885Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein2e-80299
NC_012583:683887:705090705090705980891Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein3e-80298
NC_009456:557962:557962557962558852891Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein3e-80298