Pre_GI: BLASTP Hits

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Query: NC_005140:883857:888784 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 888784, End: 889158, Length: 375

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016628:193000:215179215179215559381Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein5e-49192
NC_012667:839318:851118851118851501384Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein2e-44177
NC_012583:683887:695308695308695691384Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein2e-44177
NC_009456:557962:568251568251568634384Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein2e-44177
NC_013457:140474:162910162910163197288Vibrio sp. Ex25 chromosome 2, complete genomehypothetical protein2e-30130