Pre_GI: BLASTP Hits

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Query: NC_005139:796546:799117 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 799117, End: 799554, Length: 438

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004459:349500:395957395957396367411Vibrio vulnificus CMCP6 chromosome I, complete sequencehypothetical protein2e-75280
NC_014414:167803:180094180094180543450Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein6e-31132
NC_008228:2295841:229877322987732299240468Pseudoalteromonas atlantica T6c, complete genomeYHS5e-22102
NC_016609:4834378:483437848343784834845468Niastella koreensis GR20-10 chromosome, complete genomeYHS domain-containing protein1e-1995.5
NC_008228:2068641:206943220694322069965534Pseudoalteromonas atlantica T6c, complete genomeYHS5e-1166.2