Pre_GI: BLASTP Hits

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Query: NC_005139:1784000:1797364 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1797364, End: 1797972, Length: 609

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013456:1843000:185989818598981860506609Vibrio sp. Ex25 chromosome 1, complete genomephosphohydrolase (MutT/nudix family protein)5e-76283
NC_014965:1428902:147013314701331470444312Vibrio vulnificus MO6-24/O chromosome I, complete sequencephosphohydrolase (MutT/nudix family protein)1e-45182
NC_016602:2037162:205713520571352057704570Vibrio furnissii NCTC 11218 chromosome 1, complete sequencepyridoxamine 5'-phosphate oxidase-like FMN-binding protein5e-41167
NC_009659:2849000:286523328652332865862630Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein1e-35149
NC_013406:5954472:595797959579795958614636Paenibacillus sp. Y412MC10 chromosome, complete genomepyridoxamine 5'-phosphate oxidase-like FMN-binding protein5e-31134
NC_016111:1546505:155941715594171560082666Streptomyces cattleya NRRL 8057, complete genomeNTP pyrophosphohydrolase (fragment)4e-30130
NC_007802:3807500:381303338130333813635603Jannaschia sp. CCS1, complete genomepyridoxamine 5'-phosphate oxidase-related, FMN-binding4e-28124
NC_012723:71637:906859068591344660Burkholderia glumae BGR1 plasmid bglu_1p, complete sequencePyridoxamine 5'-phosphate oxidase-related, FMN-binding protein3e-23108
NC_003888:56225:866408664087311672Streptomyces coelicolor A3(2), complete genomehydrolase3e-1065.1
NC_010501:1286971:1308626130862613106562031Pseudomonas putida W619, complete genomepyridoxamine 5'-phosphate oxidase-related FMN-binding1e-0859.7
NC_008209:2367500:238401823840182384965948Roseobacter denitrificans OCh 114, complete genomepyridoxamine 5'-phosphate oxidase family protein, putative3e-0858.2
NC_012791:721813:7235557235557255612007Variovorax paradoxus S110 chromosome 1, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein7e-0857
NC_007912:4364215:4371101437110143731252025Saccharophagus degradans 2-40, complete genomeoxidoreductase, FAD-binding8e-0753.5
NC_009663:946285:956778956778957347570Sulfurovum sp. NBC37-1, complete genomepyridoxamine 5'-phosphate oxidase8e-0650.4