Pre_GI: BLASTP Hits

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Query: NC_005126:4333767:4333767 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 4333767, End: 4334480, Length: 714

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007517:1998342:199834219983421999088747Geobacter metallireducens GS-15, complete genomeIntegral membrane protein TerC3e-62238
NC_011146:2200142:223827622382762239028753Geobacter bemidjiensis Bem, complete genomeIntegral membrane protein TerC4e-60231
NC_009943:305854:310875310875311600726Candidatus Desulfococcus oleovorans Hxd3, complete genomeIntegral membrane protein TerC2e-57222
NC_014041:4517999:452120845212084521915708Zunongwangia profunda SM-A87 chromosome, complete genomeTerC family integral membrane protein1e-56219
NC_008314:1955793:195697719569771957729753Ralstonia eutropha H16 chromosome 2, complete sequenceMembrane protein possibly involved in tellurium resistance5e-55214
NC_004547:1600900:1604432160443216060181587Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-54212
NC_016513:1720006:173365417336541734379726Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeprotein YegH4e-54211
NC_012917:1506083:1509611150961115111971587Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeIntegral membrane protein TerC4e-54211
NC_009667:1934818:1948734194873419503021569Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceintegral membrane protein TerC3e-54211
NC_015566:1659288:1668087166808716696731587Serratia sp. AS12 chromosome, complete genomeintegral membrane protein TerC3e-54211
NC_015567:1660462:1668099166809916696851587Serratia sp. AS9 chromosome, complete genomeintegral membrane protein TerC3e-54211
NC_015224:1763848:1767480176748017690661587Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein8e-54210
NC_013421:3279499:3308508330850833102411734Pectobacterium wasabiae WPP163, complete genomeIntegral membrane protein TerC2e-53209
NC_009832:1719149:1723194172319417247801587Serratia proteamaculans 568, complete genomeIntegral membrane protein TerC1e-53209
NC_020064:1547524:1550950155095015525331584Serratia marcescens FGI94, complete genomemembrane protein TerC, possibly involved in tellurium resistance1e-53209
NC_020211:1704500:1708521170852117101041584Serratia marcescens WW4, complete genomeinner membrane protein2e-53208
NC_014500:1491660:1496310149631014978991590Dickeya dadantii 3937 chromosome, complete genomehypothetical protein3e-52204
NC_016818:1927500:1930834193083419324231590Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completemembrane protein TerC, possibly involved in tellurium resistance9e-52203
NC_012039:1399699:141580814158081416530723Campylobacter lari RM2100, complete genomeintegral membrane protein, TerC family3e-51201
NC_012560:5019900:502539150253915026137747Azotobacter vinelandii DJ, complete genomeIntegral membrane protein TerC family7e-51200
NC_021150:5019887:502537850253785026124747Azotobacter vinelandii CA6, complete genomeIntegral membrane protein TerC family7e-51200
NC_017047:1862893:1867385186738518689741590Rahnella aquatilis HX2 chromosome, complete genomeintegral membrane protein TerC1e-50199
NC_015061:1902251:1906743190674319083321590Rahnella sp. Y9602 chromosome, complete genomeIntegral membrane protein TerC1e-50199
NC_015161:199666:213352213352214131780Deinococcus proteolyticus MRP chromosome, complete genomeIntegral membrane protein TerC2e-50199
NC_005773:3253575:3269816326981632713841569Pseudomonas syringae pv. phaseolicola 1448A, complete genomemembrane protein, TerC family2e-50199
NC_007606:1999870:2002615200261520042371623Shigella dysenteriae Sd197, complete genomeputative transport protein2e-50198
NC_021066:460292:4626434626434642291587Raoultella ornithinolytica B6, complete genomeputative transmembrane protein3e-50197
NC_007005:2686551:2718182271818227197501569Pseudomonas syringae pv. syringae B728a, complete genomeCBS:Transporter-associated region:Integral membrane protein TerC9e-50196
NC_009800:2156091:2181966218196621835491584Escherichia coli HS, complete genome5e-49194
NC_004129:4596040:461209246120924612847756Pseudomonas fluorescens Pf-5, complete genomemembrane protein, TerC family8e-49193
NC_011283:1690193:1692444169244416940271584Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-48192
NC_013850:1658010:1660253166025316618361584Klebsiella variicola At-22 chromosome, complete genomeIntegral membrane protein TerC1e-48192
NC_015663:4950000:5007860500786050094461587Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative transmembrane protein1e-48192
NC_020181:360500:3647453647453663311587Enterobacter aerogenes EA1509E, complete genomePutative capsular polysaccharide transport protein YegH3e-48191
NC_012880:2399205:2399205239920524007581554Dickeya dadantii Ech703, complete genomeIntegral membrane protein TerC5e-47187
NC_007974:785216:803116803116803877762Ralstonia metallidurans CH34 chromosome 2, complete sequenceIntegral membrane protein TerC4e-47187
NC_010278:1235934:125240112524011253132732Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein1e-44179
NC_004757:2412161:2413308241330824148701563Nitrosomonas europaea ATCC 19718, complete genomeCBS domain2e-43175
NC_012214:1588573:1588573158857315901381566Erwinia pyrifoliae Ep1/96, complete genomePutative transmembrane protein YegH2e-41169
NC_017511:543583:5691765691765707321557Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomehypothetical protein2e-40166
NC_011035:566980:5929715929715945271557Neisseria gonorrhoeae NCCP11945 chromosome, complete genomehypothetical protein5e-40164
NC_014655:3141144:316204331620433162810768Leadbetterella byssophila DSM 17132 chromosome, complete genomeintegral membrane protein terc9e-40163
NC_016001:976556:989704989704990561858Flavobacterium branchiophilum, complete genomeTerC family membrane protein6e-39160
NC_013947:6221877:623327562332756234033759Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeIntegral membrane protein TerC3e-38158
NC_003296:1461538:1476136147613614777161581Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSMEMBRANE PROTEIN3e-38158
NC_020301:669000:7096267096267111761551Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeintegral membrane protein TerC7e-38157
NC_015637:819233:837382837382838212831Vibrio anguillarum 775 chromosome chromosome II, complete sequenceintegral membrane protein5e-36150
NC_004603:1464000:146888314688831469635753Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein2e-35149
NC_007799:555900:572229572229572915687Ehrlichia chaffeensis str. Arkansas, complete genomemembrane protein, TerC family4e-25114
NC_013009:721823:723279723279723977699Neorickettsia risticii str. Illinois, complete genomemembrane protein, TerC family2e-21102
NC_006831:772737:775198775198775905708Ehrlichia ruminantium str. Gardel, complete genomehypothetical protein5e-2098.2
NC_007798:703922:705371705371706045675Neorickettsia sennetsu str. Miyayama, complete genomemembrane protein, TerC family1e-1686.7
NC_005295:796437:798898798898799605708Ehrlichia ruminantium str. Welgevonden, complete genomehypothetical protein4e-1685.1
NC_006832:776286:778747778747779454708Ehrlichia ruminantium str. Welgevonden, complete genomehypothetical protein4e-1685.1
NC_016641:2700765:272182427218242722558735Paenibacillus terrae HPL-003 chromosome, complete genometerc3e-1375.1