Pre_GI: BLASTP Hits

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Query: NC_005126:3485330:3506450 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 3506450, End: 3506665, Length: 216

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012779:2755338:2769913276991327710881176Edwardsiella ictaluri 93-146, complete genomehypothetical protein7e-1579.3
NC_012912:2901021:2923965292396529251881224Dickeya zeae Ech1591, complete genome1e-1168.6
NC_012912:2285778:2306875230687523080681194Dickeya zeae Ech1591, complete genometransposase IS4 family protein1e-1168.6
NC_004337:309833:3210023210023221921191Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-1167.4
NC_004741:310382:3197293197293209191191Shigella flexneri 2a str. 2457T, complete genomehypothetical protein3e-1167.4
NC_012912:3749156:3757269375726937584621194Dickeya zeae Ech1591, complete genometransposase IS4 family protein3e-1167
NC_009778:1717458:174338817433881743657270Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1064.3
NC_010067:191190:194492194492195436945Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0960.8