Pre_GI: BLASTP Hits

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Query: NC_005126:2063667:2063667 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 2063667, End: 2064743, Length: 1077

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014722:1:3878938789400001212Burkholderia rhizoxinica HKI 454, complete genometail sheath protein gp181e-81303
NC_014722:1:3728737287384411155Burkholderia rhizoxinica HKI 454, complete genometail sheath protein gp181e-45183
NC_012912:777592:7813967813967829491554Dickeya zeae Ech1591, complete genomehypothetical protein3e-40166
NC_014623:1883259:1883259188325918848451587Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephage tail sheath protein1e-38160
NC_016599:1412000:1432264143226414339671704Owenweeksia hongkongensis DSM 17368 chromosome, complete genomephage tail sheath protein FI2e-37156
NC_015386:150000:4786478659911206Treponema succinifaciens DSM 2489 plasmid pTRESU01, completetail sheath protein8e-36151
NC_010995:3604695:3627712362771236292951584Cellvibrio japonicus Ueda107, complete genomePhage tail sheath protein3e-35149
NC_014958:3207431:3207431320743132090891659Deinococcus maricopensis DSM 21211 chromosome, complete genomeputative phage tail sheath protein4e-35149
NC_015711:7471500:7492485749248574948572373Myxococcus fulvus HW-1 chromosome, complete genomeputative Phage tail sheath protein1e-32140
NC_015514:181773:1860161860161875871572Cellulomonas fimi ATCC 484 chromosome, complete genometail sheath protein1e-32140
NC_016582:10638524:1064456110644561106461201560Streptomyces bingchenggensis BCW-1 chromosome, complete genometail sheath protein2e-32139
NC_017030:3546837:3550110355011035520621953Corallococcus coralloides DSM 2259 chromosome, complete genomeputative phage tail sheath protein5e-32139
NC_015957:6282179:6306095630609563079421848Streptomyces violaceusniger Tu 4113 chromosome, complete genomephage tail sheath protein8e-32137
NC_005125:4283345:4298235429823542999081674Gloeobacter violaceus PCC 7421, complete genomesimilar to bacteriophage major tail sheath protein9e-32137
NC_017030:3981310:4002841400284140051622322Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein2e-31137
NC_016791:1454483:1473158147315814747021545Clostridium sp. BNL1100 chromosome, complete genomephage tail sheath protein FI7e-30131
NC_010175:2925084:2945527294552729471071581Chloroflexus aurantiacus J-10-fl, complete genometail sheath protein7e-29128
NC_012032:2925000:2940637294063729422171581Chloroflexus sp. Y-400-fl, complete genometail sheath protein7e-29128
NC_011898:1802971:1824380182438018259241545Clostridium cellulolyticum H10, complete genometail sheath protein2e-28126
NC_014722:1682000:1703667170366717049351269Burkholderia rhizoxinica HKI 454, complete genometail sheath protein gp181e-27124
NC_016943:3037382:3046288304628830478351548Blastococcus saxobsidens DD2, complete genomephage tail sheath protein3e-25115
NC_014722:1:3583235832372381407Burkholderia rhizoxinica HKI 454, complete genometail sheath protein Gp187e-25115
NC_015388:2011280:2011280201128020137602481Desulfobacca acetoxidans DSM 11109 chromosome, complete genomephage tail sheath protein2e-22107
NC_014365:2004332:2010362201036220118911530Desulfarculus baarsii DSM 2075 chromosome, complete genometail sheath protein6e-1478.6
NC_014844:1773424:1794514179451417960431530Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomephage tail sheath protein6e-1478.6
NC_012881:2310141:2328807232880723299971191Desulfovibrio salexigens DSM 2638, complete genometail sheath protein3e-0963.2
NC_012416:753500:7606677606677618181152Wolbachia sp. wRi, complete genomephage tail sheath protein4e-0962.4
NC_010981:468465:4774204774204785981179Wolbachia pipientis, complete genomePhage major tail sheath protein1e-0758.2
NC_010981:1371265:1406693140669314078711179Wolbachia pipientis, complete genomePhage major tail sheath protein1e-0758.2
NC_017030:3546837:3546837354683735496352799Corallococcus coralloides DSM 2259 chromosome, complete genomephage tail sheath protein FI3e-0756.6
NC_006576:856014:8780518780518794751425Synechococcus elongatus PCC 6301, complete genomehypothetical protein1e-0654.3
NC_016830:4999946:5022154502215450233171164Pseudomonas fluorescens F113 chromosome, complete genomePhage tail sheath monomer4e-0652.8
NC_015381:2109500:2109929210992921111611233Burkholderia gladioli BSR3 chromosome 1, complete sequence7e-0652