Pre_GI: BLASTP Hits

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Query: NC_005126:1265071:1303222 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1303222, End: 1304076, Length: 855

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012912:2285778:22916302291630230302011391Dickeya zeae Ech1591, complete genomefilamentous hemagglutinin family outer membrane protein1e-60233
NC_013716:3109700:312388331238833124323441Citrobacter rodentium ICC168, complete genome1e-20100
NC_020409:1589044:1595840159584015970181179Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein3e-1685.9
NC_012214:1267589:1272737127273712770234287Erwinia pyrifoliae Ep1/96, complete genomeRhs family protein5e-1478.6
NC_006085:234127:243747243747244361615Propionibacterium acnes KPA171202, complete genomehypothetical protein2e-0963.2
NC_014039:261126:2713222713222742342913Propionibacterium acnes SK137 chromosome, complete genomeRHS repeat-associated core domain protein4e-0858.5
NC_006085:234127:2450192450192478802862Propionibacterium acnes KPA171202, complete genomeRHS-family protein5e-0858.5
NC_008343:1870000:1870330187033018725222193Granulibacter bethesdensis CGDNIH1, complete genomehemolysin1e-0653.9