Pre_GI: BLASTP Hits

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Query: NC_005126:1223042:1249310 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1249310, End: 1250062, Length: 753

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015567:313035:334358334358335116759Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element membrane protein4e-76284
NC_015566:316340:334193334193334951759Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element membrane protein4e-76284
NC_009832:358291:379739379739380497759Serratia proteamaculans 568, complete genomehypothetical protein8e-76283
NC_004547:611178:628306628306629061756Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein7e-70263
NC_013892:3278647:330214733021473302905759Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-69262
NC_014228:3391500:342500934250093425767759Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein7e-69260
NC_013892:1483000:149426014942601495018759Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein8e-67253
NC_014029:331919:365028365028365684657Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-65249
NC_009708:4182460:419473741947374195489753Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-65248
NC_014532:3555550:357942535794253580123699Halomonas elongata DSM 2581, complete genomehypothetical protein4e-39161
NC_018080:5091772:515637851563785157124747Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-36153
NC_009656:4527457:463137046313704632116747Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-36152
NC_008463:5313527:532795353279535328603651Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein9e-36150
NC_007005:1636875:164016416401641640913750Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-34146
NC_004129:5373886:542770154277015428450750Pseudomonas fluorescens Pf-5, complete genomehypothetical protein8e-34144
NC_004578:934867:951854951854952603750Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-33143
NC_011662:1058794:105804810580481058797750Thauera sp. MZ1T, complete genomehypothetical protein1e-33143
NC_011662:1041725:105804810580481058797750Thauera sp. MZ1T, complete genomehypothetical protein1e-33143
NC_008782:2326439:234158523415852342334750Acidovorax sp. JS42, complete genomehypothetical protein9e-33140
NC_008825:2525380:254705825470582547807750Methylibium petroleiphilum PM1, complete genomehypothetical protein8e-33140
NC_015422:1876102:187941418794141880163750Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element membrane protein8e-33140
NC_011901:2983555:298625529862552987004750Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein2e-32139
NC_006513:1379735:145619314561931456942750Azoarcus sp. EbN1, complete genomehypothetical protein4e-32138
NC_008752:558828:569843569843570592750Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein4e-31135
NC_012691:2614603:266018026601802660929750Tolumonas auensis DSM 9187, complete genomehypothetical protein9e-30130
NC_012912:483390:512527512527513276750Dickeya zeae Ech1591, complete genomehypothetical protein1e-29130
NC_003919:2639080:264243026424302643179750Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein8e-29127
NC_008344:49039:935309353094279750Nitrosomonas eutropha C91, complete genomehypothetical protein1e-28127
NC_010002:4544818:456297945629794563740762Delftia acidovorans SPH-1, complete genomehypothetical protein1e-28126
NC_010170:4533416:453265845326584533419762Bordetella petrii, complete genomehypothetical protein1e-28126
NC_011992:1234610:123461012346101235371762Acidovorax ebreus TPSY, complete genomehypothetical protein6e-28124
NC_010170:1498253:153599415359941536743750Bordetella petrii, complete genomehypothetical protein2e-27122
NC_009138:1974935:201550420155042016253750Herminiimonas arsenicoxydans, complete genomehypothetical protein6e-27120
NC_007484:667879:680571680571681302732Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein1e-26120
NC_020181:3328844:334830633483063348989684Enterobacter aerogenes EA1509E, complete genomehypothetical protein9e-23107
NC_016830:3869572:391994739199473920381435Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein8e-21100
NC_015379:2417312:244803424480342448783750Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein5e-2098.2
NC_012731:600518:614926614926615558633Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-0963.2
NC_016830:3869572:392280539228053923116312Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein8e-0754.3