Pre_GI: BLASTP Hits

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Query: NC_004631:2615908:2625217 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2625217, End: 2627904, Length: 2688

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2612809:2622118262211826248052688Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein01704
NC_003198:331314:3532093532093558962688Salmonella enterica subsp. enterica serovar Typhi str. CT18,outer membrane fimbrial user protein01702
NC_006511:2540500:2549942254994225526292688Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCoutermembrane fimbrial usher protein01689
NC_011147:2536000:2545478254547825481652688Salmonella enterica subsp. enterica serovar Paratyphi A stroutermembrane fimbrial usher protein01687
NC_011083:338910:3518153518153545022688Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,TcfC protein01677
NC_011094:334267:3540933540933567802688Salmonella enterica subsp. enterica serovar Schwarzengrund strTcfC protein01672
NC_020181:1317647:1320274132027413229912718Enterobacter aerogenes EA1509E, complete genomeAlpha-fimbriae usher protein2e-113410
NC_016818:3816000:3834095383409538367882694Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein2e-113410
NC_017047:3869350:3889905388990538925982694Rahnella aquatilis HX2 chromosome, complete genomeouter membrane fimbrial usher protein8e-109395
NC_015061:3801927:3822514382251438252072694Rahnella sp. Y9602 chromosome, complete genomeouter membrane fimbrial usher protein8e-109395
NC_016835:405482:4153434153434180302688Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,hypothetical protein7e-98358
NC_009788:16360:3184431844344622619Escherichia coli E24377A plasmid pETEC_73, complete sequencefimbrial usher family protein2e-83311
NC_008570:1094442:1100017110001711024522436Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein6e-0757
NC_010515:1678487:1692696169269616952062511Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencehypothetical protein8e-0653.1