Pre_GI: BLASTP Hits

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Query: NC_004603:3080614:3101927 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 3101927, End: 3102514, Length: 588

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:238580:273570273570274157588Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein2e-90331
NC_016445:2663837:269748526974852698153669Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein7e-90329
NC_012582:272320:305960305960306628669Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein7e-90329
NC_012578:224559:258205258205258873669Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein7e-90329
NC_009457:2764972:279861227986122799280669Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein7e-90329
NC_002505:238569:273478273478274146669Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein7e-90329
NC_015633:461143:485030485030485623594Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein5e-89326