Pre_GI: BLASTP Hits

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Query: NC_004603:230000:244604 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 244604, End: 245569, Length: 966

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012791:2052923:206950820695082070482975Variovorax paradoxus S110 chromosome 1, complete genomeprotein of unknown function DUF2014e-107387
NC_012793:3275751:328201832820183283001984Geobacillus sp. WCH70, complete genomeprotein of unknown function DUF2016e-54211
NC_015573:1729057:173940917394091740383975Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeATP-grasp fold domain-containing protein2e-46186
NC_007644:779376:789606789606790586981Moorella thermoacetica ATCC 39073, complete genomeProtein of unknown function DUF2016e-36151
NC_014220:170021:187873187873188853981Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeprotein of unknown function DUF2017e-36151
NC_020291:4944835:4979620497962049806541035Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomecarbamoylphosphate synthase large subunit1e-32140
NC_010424:1857062:186517418651741866112939Candidatus Desulforudis audaxviator MP104C, complete genomeprotein of unknown function DUF2013e-31135
NC_010723:801215:819262819262820209948Clostridium botulinum E3 str. Alaska E43, complete genomedomain of unknown function family4e-30132
NC_010674:828191:842046842046842993948Clostridium botulinum B str. Eklund 17B, complete genomedomain of unknown function family6e-30131
NC_018876:2277160:227888522788852279883999Methanolobus psychrophilus R15 chromosome, complete genomeCarB protein5e-28125
NC_017068:2827568:2842424284242428434281005Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein2e-27123
NC_014151:813755:835238835238835777540Cellulomonas flavigena DSM 20109 chromosome, complete genome1e-25117
NC_009615:487173:496348496348497325978Parabacteroides distasonis ATCC 8503 chromosome, complete genomecarbamoyl phosphate synthase-like protein2e-25116
NC_014370:1117283:112270811227081123697990Prevotella melaninogenica ATCC 25845 chromosome chromosome I,ATP-grasp domain protein1e-23110
NC_013410:3280039:328650732865073287466960Fibrobacter succinogenes subsp. succinogenes S85 chromosome,carbamoyl phosphate synthase-like protein3e-23109
NC_012881:4055962:4063805406380540648061002Desulfovibrio salexigens DSM 2638, complete genomeprotein of unknown function DUF2018e-23107
NC_013202:1367447:138825913882591389215957Halomicrobium mukohataei DSM 12286, complete genomeprotein of unknown function DUF2012e-1893.6
NC_016112:806256:821505821505822446942Methylomicrobium alcaliphilum chromosome, complete genomeATP-dependent carboligase5e-1788.6
NC_020210:3169258:317993031799303180898969Geobacillus sp. GHH01, complete genomeATP-grasp domain-containing protein2e-1686.3
NC_011832:820658:8612698612698623241056Candidatus Methanosphaerula palustris E1-9c, complete genomeprotein of unknown function DUF2019e-1684.3
NC_013411:3251500:326084632608463261814969Geobacillus sp. Y412MC61, complete genomeprotein of unknown function DUF2014e-1479
NC_014915:3259440:326681532668153267783969Geobacillus sp. Y412MC52 chromosome, complete genomeprotein of unknown function DUF2014e-1479
NC_010725:4035397:4104761410476141060531293Methylobacterium populi BJ001, complete genomeprotein of unknown function DUF2016e-1478.6
NC_012804:2017531:2044093204409320451421050Thermococcus gammatolerans EJ3, complete genomeCarbamoylphosphate synthase large subunit region, short form6e-1478.6
NC_009848:3190619:3199508319950832007881281Bacillus pumilus SAFR-032, complete genomecarbamoylphosphate synthase large subunit short form4e-1272.4
NC_002927:118982:1291771291771302471071Bordetella bronchiseptica RB50, complete genomehypothetical protein2e-1170.1
NC_015160:136055:141918141918142904987Odoribacter splanchnicus DSM 20712 chromosome, complete genomeATP-grasp fold domain-containing protein3e-1169.7
NC_007413:2961611:2972576297257629738621287Anabaena variabilis ATCC 29413, complete genomeputative carbamoylphosphate synthase large subunit short form3e-1169.7
NC_007498:1774859:178196317819631782946984Pelobacter carbinolicus DSM 2380, complete genomecarbamoylphosphate synthase large subunit4e-1168.9
NC_009659:2523874:2544612254461225456641053Janthinobacterium sp. Marseille chromosome, complete genomecarbamoyl phosphate synthase-like protein9e-1167.8
NC_012881:4023895:402904640290464030020975Desulfovibrio salexigens DSM 2638, complete genomecarbamoyl-phosphate synthase L chain, ATP-binding4e-1065.9
NC_015138:4905935:4915451491545149168241374Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeATP-grasp fold domain-containing protein2e-0963.5
NC_014650:376070:392058392058392975918Geobacillus sp. Y4.1MC1 chromosome, complete genomehypothetical protein3e-0962.8
NC_017068:1852708:1896375189637518974391065Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein5e-0962
NC_009615:4425500:443098644309864431954969Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein8e-0961.6
NC_019978:2260395:2260949226094922622321284Halobacteroides halobius DSM 5150, complete genomecarbamoylphosphate synthase large subunit3e-0859.7
NC_011026:2533017:2547702254770225497352034Chloroherpeton thalassium ATCC 35110, complete genomeNAD-dependent epimerase/dehydratase5e-0858.9
NC_000911:352263:3611633611633621881026Synechocystis sp. PCC 6803, complete genomehypothetical protein8e-0858.2
NC_017039:352263:3611633611633621881026Synechocystis sp. PCC 6803 substr. PCC-P, complete genomecarbamoyl phosphate synthase-like-protein8e-0858.2
NC_017052:352251:3611513611513621761026Synechocystis sp. PCC 6803 substr. PCC-N, complete genomecarbamoyl phosphate synthase-like-protein8e-0858.2
NC_017277:352263:3611633611633621881026Synechocystis sp. PCC 6803, complete genomecarbamoyl phosphate synthase-like-protein8e-0858.2
NC_009802:1525144:1543593154359315446031011Campylobacter concisus 13826, complete genomesodium-dependent transporter1e-0757.4