Pre_GI: BLASTP Hits

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Query: NC_004578:934867:939884 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 939884, End: 941068, Length: 1185

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011837:2605409:2625295262529526265211227Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-31137
NC_009706:2673906:2693792269379226950181227Clostridium kluyveri DSM 555 chromosome, complete genomeABC transporter permease1e-31137
NC_015690:3941113:3963085396308539643141230Paenibacillus mucilaginosus KNP414 chromosome, complete genomemacrolide efflux pump6e-26118
NC_016935:1365463:1384330138433013855591230Paenibacillus mucilaginosus 3016 chromosome, complete genomemacrolide efflux pump1e-25117
NC_015385:2050648:2065406206540620666261221Treponema succinifaciens DSM 2489 chromosome, complete genomeH+ Antiporter protein2e-25117
NC_008095:6559009:6565661656566165669051245Myxococcus xanthus DK 1622, complete genometransporter, major facilitator family8e-22105
NC_011830:1190502:1206839120683912080861248Desulfitobacterium hafniense DCB-2, complete genomemajor facilitator superfamily MFS_15e-2099
NC_016048:4163225:4194075419407541952621188Oscillibacter valericigenes Sjm18-20, complete genomemajor facilitator superfamily transporter9e-2098.2
NC_014376:1879000:1893130189313018943411212Clostridium saccharolyticum WM1 chromosome, complete genomemajor facilitator superfamily MFS_11e-1997.8
NC_021171:2562000:2580717258071725820211305Bacillus sp. 1NLA3E, complete genomemajor facilitator superfamily protein2e-1996.7
NC_003272:3237643:3238656323865632399691314Nostoc sp. PCC 7120, complete genomehypothetical protein4e-1995.9
NC_010376:49185:4985649856511571302Finegoldia magna ATCC 29328, complete genomemacrolide-efflux pump1e-1791.3
NC_019757:1789237:1789237178923717905591323Cylindrospermum stagnale PCC 7417, complete genomearabinose efflux permease family protein1e-1480.9
NC_014623:5029932:5068318506831850694991182Stigmatella aurantiaca DW4/3-1 chromosome, complete genomemajor facilitator family transporter2e-1377
NC_017277:15937:2183821838231211284Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-1273.9
NC_017052:15937:2183821838231211284Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein2e-1273.9
NC_017039:15937:2183821838231211284Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein2e-1273.9
NC_000911:15937:2183821838231211284Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-1273.9
NC_011059:65414:8983789837911651329Prosthecochloris aestuarii DSM 271, complete genomemajor facilitator superfamily MFS_13e-1273.6
NC_014151:813755:8364008364008377701371Cellulomonas flavigena DSM 20109 chromosome, complete genomemajor facilitator superfamily MFS_12e-1170.5
NC_014391:1910273:1930307193030719316441338Micromonospora aurantiaca ATCC 27029 chromosome, complete genomemajor facilitator superfamily protein5e-1169.3
NC_017094:828836:8916318916318929111281Leptospirillum ferrooxidans C2-3, complete genomemajor facilitator superfamily MFS_18e-1168.6
NC_014335:2274774:2292069229206922933161248Bacillus cereus biovar anthracis str. CI chromosome, completeputative ABC transporter permease1e-1068.2
NC_008600:2353696:2374940237494023761931254Bacillus thuringiensis str. Al Hakam, complete genomepermease1e-1068.2
NC_015574:806762:8079678079678092231257Methanobacterium sp. SWAN-1 chromosome, complete genomemajor facilitator superfamily protein2e-1067
NC_019896:2579036:2593446259344625947381293Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein4e-1066.2
NC_007907:4926548:4941947494194749431911245Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-1065.5
NC_011653:748844:7666147666147679061293Thermosipho africanus TCF52B, complete genomemacrolide-efflux determinant2e-0964.3
NC_000964:1474451:1474451147445114757431293Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-0963.9
NC_010162:6562571:6578627657862765800091383Sorangium cellulosum 'So ce 56', complete genomemajor facilitator superfamily permease5e-0962.4
NC_015856:3675592:3690769369076936920911323Collimonas fungivorans Ter331 chromosome, complete genomemajor facilitator superfamily (MFS) multidrug efflux pump5e-0962.4
NC_015172:1002872:1005451100545110066681218Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomemajor facilitator superfamily MFS_17e-0962
NC_015711:2050360:2071006207100620722591254Myxococcus fulvus HW-1 chromosome, complete genomemajor facilitator transporter7e-0962
NC_014206:2516000:2539740253974025409601221Geobacillus sp. C56-T3 chromosome, complete genomemajor facilitator superfamily protein1e-0861.2
NC_014915:1080793:1091409109140910926291221Geobacillus sp. Y412MC52 chromosome, complete genomemajor facilitator superfamily MFS_11e-0861.2
NC_013411:1941762:1951465195146519526851221Geobacillus sp. Y412MC61, complete genomemajor facilitator superfamily MFS_11e-0861.2
NC_009848:3582384:3599030359903036002921263Bacillus pumilus SAFR-032, complete genomemajor facilitator superfamily macrolide:cation symporter (or antiporter or uniporter)6e-0858.9
NC_003888:4750489:4751293475129347526721380Streptomyces coelicolor A3(2), complete genomeintegral membrane efflux protein6e-0858.9
NC_011894:4360577:4368380436838043695941215Methylobacterium nodulans ORS 2060, complete genomemajor facilitator superfamily MFS_18e-0858.5
NC_011772:1684404:1686682168668216879441263Bacillus cereus G9842, complete genomeputative transporter2e-0757.4
NC_015589:2049328:2064463206446320657221260Desulfotomaculum ruminis DSM 2154 chromosome, complete genomemajor facilitator superfamily protein2e-0757
NC_013406:4023367:4041465404146540427151251Paenibacillus sp. Y412MC10 chromosome, complete genomemajor facilitator superfamily protein6e-0755.5
NC_020157:36234:4601746017474081392Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequencemajor facilitator superfamily MFS_11e-0654.7
NC_016641:3272500:3291805329180532930761272Paenibacillus terrae HPL-003 chromosome, complete genomePermease of the major facilitator superfamily protein2e-0654.3
NC_009617:1165539:1167177116717711684121236Clostridium beijerinckii NCIMB 8052 chromosome, complete genomemajor facilitator superfamily transporter4e-0653.1
NC_013093:2230171:2247241224724122485511311Actinosynnema mirum DSM 43827, complete genomemajor facilitator superfamily MFS_14e-0653.1
NC_013525:556036:5726215726215738831263Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomemajor facilitator superfamily MFS_13e-0653.1
NC_009633:4308016:4327713432771343289901278Alkaliphilus metalliredigens QYMF chromosome, complete genomemajor facilitator superfamily transporter3e-0653.1
NC_014168:56728:6843468434697201287Segniliparus rotundus DSM 44985 chromosome, complete genomemajor facilitator superfamily protein6e-0652.4
NC_010999:2483000:2494893249489324961251233Lactobacillus casei, complete genomePermeases of the major facilitator superfamily7e-0652