Pre_GI: BLASTP Hits

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Query: NC_004578:895019:907933 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 907933, End: 908535, Length: 603

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:4282840:430908743090874309545459Pseudomonas syringae pv. phaseolicola 1448A, complete genomeProtein of unknown function (DUF1349) superfamily2e-80298
NC_014393:4612301:463135746313574631950594Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein5e-48190
NC_014387:2297304:230261223026122303211600Butyrivibrio proteoclasticus B316 chromosome 1, complete genomehypothetical protein4e-46184
NC_016945:324519:340992340992341615624Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein1e-44179
NC_016446:49618:662416624166864624Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein4e-44177
NC_002506:324552:341170341170341799630Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein4e-44177
NC_017098:2562131:256915025691502569731582Spirochaeta africana DSM 8902 chromosome, complete genomehypothetical protein7e-35146
NC_015556:2265940:229969022996902300274585Pseudomonas fulva 12-X chromosome, complete genomeprotein of unknown function DUF13497e-2097.1
NC_015424:3112637:315979831597983160379582Aeromonas veronii B565 chromosome, complete genomehypothetical protein2e-1892.4
NC_016514:506611:532056532056532628573Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein3e-1891.7
NC_011283:785973:806184806184806756573Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein3e-1891.3
NC_007005:4515853:454425845442584544833576Pseudomonas syringae pv. syringae B728a, complete genomeProtein of unknown function DUF13495e-1890.9
NC_014623:1074299:112778311277831128478696Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein6e-1890.5
NC_009348:3261500:326565332656533266234582Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein1e-1789.7
NC_005773:1675793:169055516905551691130576Pseudomonas syringae pv. phaseolicola 1448A, complete genomeProtein of unknown function (DUF1349) superfamily2e-1789
NC_019673:967559:972053972053972616564Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1685.5
NC_011415:308825:312284312284312859576Escherichia coli SE11 chromosome, complete genomehypothetical protein5e-1580.9
NC_020209:1986503:201996520199652020588624Pseudomonas poae RE*1-1-14, complete genomehypothetical protein3e-1168.2
NC_014562:469154:481534481534482130597Pantoea vagans C9-1 chromosome, complete genomehypothetical protein5e-1167.8
NC_010001:1745089:176938117693811769956576Clostridium phytofermentans ISDg, complete genomeprotein of unknown function DUF13496e-1063.9
NC_014151:657382:661789661789662415627Cellulomonas flavigena DSM 20109 chromosome, complete genomeprotein of unknown function DUF13491e-0756.6
NC_012914:5194791:519629851962985196885588Paenibacillus sp. JDR-2, complete genomeprotein of unknown function DUF13492e-0652.8