Pre_GI: BLASTP Hits

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Query: NC_004578:5916711:5917963 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 5917963, End: 5920923, Length: 2961

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:3797830:3801463380146338045613099Pseudomonas poae RE*1-1-14, complete genomeautotransporter01628
NC_016641:2894899:2931814293181429335831770Paenibacillus terrae HPL-003 chromosome, complete genomemembrane-associated phospholipid phosphatase2e-99364
NC_002927:960369:9840319840319882484218Bordetella bronchiseptica RB50, complete genomeautotransporter9e-99362
NC_011002:703194:7031947031947051611968Burkholderia cenocepacia J2315 chromosome 3, complete sequencePAP2 superfamily protein8e-88325
NC_014217:2760898:2795981279598128024816501Starkeya novella DSM 506 chromosome, complete genomeouter membrane autotransporter barrel domain protein1e-85318
NC_016078:913713:9137139137139172103498Pelagibacterium halotolerans B2 chromosome, complete genomeautotransporter3e-82307
NC_007005:4411388:4440217444021744433333117Pseudomonas syringae pv. syringae B728a, complete genomeOuter membrane autotransporter barrel4e-81303
NC_009832:5214850:5237497523749752405113015Serratia proteamaculans 568, complete genomeouter membrane autotransporter barrel domain2e-79297
NC_009832:5214850:5234327523432752374283102Serratia proteamaculans 568, complete genomeouter membrane autotransporter barrel domain2e-76288
NC_007005:4411388:4443425444342544464303006Pseudomonas syringae pv. syringae B728a, complete genomeOuter membrane autotransporter barrel9e-76285
NC_015566:5197624:5216285521628552193743090Serratia sp. AS12 chromosome, complete genomeouter membrane autotransporter barrel domain-containing protein2e-73277
NC_014923:3968000:3988816398881639926463831Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeouter membrane autotransporter barrel domain protein2e-71271
NC_016642:3554000:3554062355406235606706609Pseudovibrio sp. FO-BEG1 chromosome, complete genomeOuter membrane autotransporter barrel domain-containing protein2e-68261
NC_014217:4550544:4552335455233545552322898Starkeya novella DSM 506 chromosome, complete genomeouter membrane autotransporter barrel domain protein7e-63243
NC_008687:256692:2635302635302670243495Paracoccus denitrificans PD1222 chromosome 2, complete sequenceouter membrane autotransporter barrel domain9e-63242
NC_008687:229941:2408322408322428652034Paracoccus denitrificans PD1222 chromosome 2, complete sequenceouter membrane autotransporter barrel domain2e-53211
NC_016514:1142607:1168896116889611719583063Enterobacter cloacae EcWSU1 chromosome, complete genomeextracellular serine protease8e-42173
NC_015458:3390674:3407114340711434095162403Pusillimonas sp. T7-7 chromosome, complete genomeautotransporter5e-38160
NC_016642:1990684:1990684199068419959935310Pseudovibrio sp. FO-BEG1 chromosome, complete genomeautotransporter3e-34147
NC_010170:209514:2114802114802158144335Bordetella petrii, complete genomeautotransporter2e-32141
NC_010407:410918:4319704319704333131344Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative phosphatase1e-22109
NC_011593:2372362:2391231239123123947703540Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,LPXTG-motif cell wall anchor domain-containing protein2e-20102
NC_017219:2372000:2391022239102223945883567Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative 5'-nucleotidase2e-20102
NC_007164:1839154:1839154183915418404131260Corynebacterium jeikeium K411, complete genomeputative phosphatase2e-20102
NC_006905:3717306:3720295372029537215661272Salmonella enterica subsp. enterica serovar Choleraesuis strputative phosphatase2e-1999
NC_012917:569856:5727095727095750332325Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeouter membrane autotransporter barrel domain protein2e-1585.5
NC_013517:3948500:3965206396520639679472742Sebaldella termitidis ATCC 33386, complete genomeouter membrane autotransporter barrel domain protein5e-1584
NC_006138:225832:2646812646812677223042Desulfotalea psychrophila LSv54, complete genomesimilar to serine protease4e-1480.9
NC_013282:3719500:3731436373143637343422907Cronobacter turicensis, complete genomehypothetical protein2e-1379
NC_005090:1812833:1829073182907318321953123Wolinella succinogenes DSM 1740, complete genomehypothetical protein6e-1377
NC_012913:1832500:1853020185302018562503231Aggregatibacter aphrophilus NJ8700, complete genomeouter membrane autotransporter barrel2e-1275.5
NC_006138:225832:2612312612312642242994Desulfotalea psychrophila LSv54, complete genomesimilar to serine protease3e-1274.7
NC_011894:4934304:4948723494872349501411419Methylobacterium nodulans ORS 2060, complete genomephosphoesterase PA-phosphatase related9e-1273.2
NC_015388:269301:2743472743472837249378Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeouter membrane autotransporter barrel domain protein3e-1171.6
NC_004129:5723787:575496357549635755676714Pseudomonas fluorescens Pf-5, complete genomeacid phosphatase, putative8e-1170.1
NC_011027:1488455:1498471149847115040325562Chlorobaculum parvum NCIB 8327, complete genomefilamentous haemagglutinin family outer membrane protein3e-0758.2
NC_018645:1798874:1805861180586118145548694Desulfobacula toluolica Tol2, complete genomeouter membrane autotransporter barrel protein2e-0655.8
NC_010278:398521:4096534096534124512799Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,serotype-specific antigen 14e-0654.3
NC_009053:393700:4048234048234076212799Actinobacillus pleuropneumoniae L20, complete genomeserotype-specific antigen 1 precursor6e-0653.9
NC_012796:3267569:3305895330589533121406246Desulfovibrio magneticus RS-1, complete genomehypothetical protein9e-0653.1