Pre_GI: BLASTP Hits

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Query: NC_004578:3817330:3841396 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 3841396, End: 3842001, Length: 606

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:3262000:328592232859223286539618Pseudomonas poae RE*1-1-14, complete genomephage tail protein I6e-72270
NC_020181:5130513:517480151748015175409609Enterobacter aerogenes EA1509E, complete genomePhage tail fibers3e-55214
NC_020064:871338:888846888846889454609Serratia marcescens FGI94, complete genomephage tail protein, P2 protein I family3e-54211
NC_012779:3016327:301572830157283016330603Edwardsiella ictaluri 93-146, complete genometail protein I (GpI)5e-54210
NC_014837:3739408:376226537622653762879615Pantoea sp. At-9b chromosome, complete genomephage tail protein I5e-53207
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,6e-53206
NC_014306:103545:129385129385129990606Erwinia billingiae Eb661, complete genomePhage tail protein I4e-52204
NC_003198:4453457:448475144847514485356606Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative phage tail protein6e-51200
NC_014562:1698253:171940817194081720016609Pantoea vagans C9-1 chromosome, complete genomeTail protein I (GpI)2e-50198
NC_014228:3022903:303719030371903037798609Xenorhabdus nematophila ATCC 19061, complete genomeTail protein I (GpI)3e-49194
NC_012967:2105251:210812021081202108650531Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein5e-49193
NC_016818:1605918:163113516311351631665531Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completephage tail protein, P2 protein I family5e-48190
NC_017047:1551836:157879415787941579324531Rahnella aquatilis HX2 chromosome, complete genomephage Tail protein I1e-47189
NC_020064:871338:880257880257880823567Serratia marcescens FGI94, complete genomephage tail protein, P2 protein I family8e-47186
NC_007613:1353500:137547613754761376006531Shigella boydii Sb227, complete genomeputative phage tail protein8e-44176
NC_010658:1772994:177388417738841774414531Shigella boydii CDC 3083-94, complete genomephage tail protein I8e-44176
NC_015061:1598920:162735216273521627879528Rahnella sp. Y9602 chromosome, complete genomephage tail protein I2e-43175
NC_009648:3803622:381383838138383814434597Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage tail protein1e-40166
NC_016845:1773416:179610017961001796699600Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,tail protein I7e-40163
NC_003919:3113343:311586131158613116403543Xanthomonas axonopodis pv. citri str. 306, complete genomephage-related tail protein4e-24111
NC_011740:2737467:275733027573302757893564Escherichia fergusonii ATCC 35469, complete genomeTail protein I7e-24110
NC_012962:4942000:494638149463814946773393Photorhabdus asymbiotica, complete genomeputative bacteriophage protein precursor4e-22104
CP002797:1960000:197393219739321974558627Escherichia coli NA114, complete genomeputative phage tail protein5e-21100
NC_009801:2159123:218151221815122182138627Escherichia coli E24377A, complete genomephage tail protein I7e-21100
NC_012724:1892000:191419219141921914737546Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein4e-1787.8
NC_007434:3973145:397726239772623977675414Burkholderia pseudomallei 1710b chromosome I, complete sequencephage tail protein I1e-1583.2
NC_012751:1988280:199800819980081998517510Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completephage tail protein I9e-1580.1
NC_009850:1651410:166491316649131665551639Arcobacter butzleri RM4018, complete genometail protein I, putative1e-1376.6
NC_012962:4942000:494616049461604946435276Photorhabdus asymbiotica, complete genomeputative bacteriophage protein precursor1e-1272.8
NC_017192:1885457:191287819128781913426549Arcobacter sp. L, complete genomephage tail protein3e-0962
NC_010382:3643288:364706036470603647707648Lysinibacillus sphaericus C3-41, complete genomephage tail protein7e-0857
NC_014307:1765230:178180217818021782347546Ralstonia solanacearum CFBP2957 chromosome, complete genomephage tail protein3e-0651.6