Pre_GI: BLASTP Hits

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Query: NC_004578:3193490:3201393 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 3201393, End: 3201959, Length: 567

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:3452885:348694434869443487549606Pseudomonas fluorescens Pf-5, complete genomeSCO1/SenC family protein9e-82302
NC_015733:2194676:219918321991832199752570Pseudomonas putida S16 chromosome, complete genomeelectron transport protein SCO1/SenC1e-69262
NC_015563:5289875:530537953053795306044666Delftia sp. Cs1-4 chromosome, complete genomeelectron transport protein SCO1/SenC4e-49194
NC_013194:2020134:202216120221612022742582Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeelectron transport protein SCO1/SenC4e-34144
NC_011662:1160887:116258311625831163188606Thauera sp. MZ1T, complete genomeelectron transport protein SCO1/SenC9e-34142
NC_014010:1020488:105980110598011060493693Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeUncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems8e-27119
NC_013525:556036:571473571473572132660Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeelectron transport protein SCO1/SenC1e-26119
NC_009937:412302:429293429293429892600Azorhizobium caulinodans ORS 571, complete genomeputative inner mitochondrial membrane protein Sco1p precursor3e-26118
NC_008740:3602367:362009236200923620727636Marinobacter aquaeolei VT8, complete genomeelectron transport protein SCO1/SenC2e-22105
NC_017506:93494:951899518995812624Marinobacter adhaerens HP15 chromosome, complete genomeelectron transport protein SCO1/SenC1e-22105
NC_015387:942974:967994967994968584591Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeelectron transport protein SCO1/SenC3e-22104
NC_014010:1020488:106096810609681061618651Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeSCO1/2 family protein5e-2097.4
NC_010002:2933909:295791029579102958164255Delftia acidovorans SPH-1, complete genomeSCO1/SenC family protein8e-2096.7
NC_016830:81382:936909369094325636Pseudomonas fluorescens F113 chromosome, complete genomeprotein PrrC4e-1890.9
NC_015637:669593:688983688983689591609Vibrio anguillarum 775 chromosome chromosome II, complete sequencehypothetical protein1e-1789.7
NC_009488:1165927:118068711806871181274588Orientia tsutsugamushi str. Boryong, complete genomeelectron transport protein4e-1684.7
NC_015379:89441:108218108218108853636Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative copper-binding protein3e-1684.7
NC_009952:3596399:361150136115013612121621Dinoroseobacter shibae DFL 12, complete genomeregulatory protein SenC2e-1582
NC_013209:2248119:227405022740502274832783Acetobacter pasteurianus IFO 3283-01, complete genomeelectron transport transmembrane protein Sco1/SenC/PrrC3e-1581.6
NC_015186:2884866:289807028980702898792723Acidiphilium multivorum AIU301, complete genomeSenC protein7e-1580.5
NC_014012:207289:218254218254218946693Shewanella violacea DSS12, complete genomeSCO1/SenC family protein2e-1478.6
NC_011313:871445:872563872563873129567Aliivibrio salmonicida LFI1238 chromosome 2, complete sequencehypothetical protein4e-1271.2
NC_007614:2517226:253824225382422538856615Nitrosospira multiformis ATCC 25196 chromosome 1, completeElectron transport protein SCO1/SenC1e-1169.3
NC_015186:755000:766637766637767191555Acidiphilium multivorum AIU301, complete genomeSCO1/SenC family protein2e-1065.9
NC_009484:661089:674489674489675043555Acidiphilium cryptum JF-5 chromosome, complete genomeelectron transport protein SCO1/SenC2e-1065.9
NC_012440:373863:379752379752380354603Persephonella marina EX-H1, complete genomeelectron transport protein SCO1/SenC1e-0756.2
NC_015914:2658845:267383126738312674493663Cyclobacterium marinum DSM 745 chromosome, complete genomeelectron transport protein SCO1/SenC8e-0753.5
NC_009725:2072475:209814520981452098768624Bacillus amyloliquefaciens FZB42, complete genomeYpmQ3e-0651.6
NC_020410:2068500:209095420909542091577624Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeassembly factor BSco of the Cu(A) site of cytochrome c oxidase3e-0651.6
NC_019842:2134803:215616721561672156748582Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,cytochrome c oxidase3e-0651.2