Pre_GI: BLASTP Hits

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Query: NC_004547:611178:621156 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 621156, End: 621848, Length: 693

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:701005:736693736693737391699Pectobacterium wasabiae WPP163, complete genomehypothetical protein5e-118423
NC_012779:305969:324506324506325228723Edwardsiella ictaluri 93-146, complete genomehypothetical protein9e-49193
NC_009832:4564752:456702845670284567747720Serratia proteamaculans 568, complete genomehypothetical protein2e-48192
NC_015567:313035:314780314780315496717Serratia sp. AS9 chromosome, complete genomehypothetical protein7e-48190
NC_014029:331919:349287349287350003717Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-47187
NC_016816:4232680:423336142333614234104744Pantoea ananatis LMG 5342, complete genomehypothetical protein4e-37154
NC_012691:779826:801775801775802461687Tolumonas auensis DSM 9187, complete genomehypothetical protein3e-36151
NC_010102:4477836:449716344971634497942780Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-36150
NC_011750:1978801:200340720034072004126720Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-32139
NC_014121:398012:420610420610421353744Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-32139
NC_002940:78392:792317923179968738Haemophilus ducreyi 35000HP, complete genomehypothetical protein9e-32137
NC_014562:983398:991368991368992093726Pantoea vagans C9-1 chromosome, complete genomehypothetical protein1e-30133
NC_009832:358291:360027360027360572546Serratia proteamaculans 568, complete genomehypothetical protein3e-29128
NC_016832:4368948:438617443861744386896723Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-27121
NC_009705:78000:929879298793670684Yersinia pseudotuberculosis IP 31758 plasmid_153kb, completehypothetical protein5e-25114
NC_012125:4481808:450147945014794502159681Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-24111
NC_004631:4381724:439909143990914399672582Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein7e-1994
NC_003198:4397074:441444144144414415022582Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein7e-1994
NC_009656:4527457:457678245767824577483702Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-1583.6
NC_018080:5091772:509999150999915100692702Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-1582.8
NC_008463:5246954:525450852545085255209702Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-1480.1
NC_007005:1705406:172171817217181722419702Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-1375.9
NC_004129:5373886:538118153811815381870690Pseudomonas fluorescens Pf-5, complete genomehypothetical protein2e-1273.2
NC_010418:70000:847248472485422699Clostridium botulinum A3 str. Loch Maree plasmid pCLK, completehypothetical protein1e-0550.4