Pre_GI: BLASTP Hits

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Query: NC_004547:442927:452395 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 452395, End: 452937, Length: 543

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013592:4511478:451998445199844520526543Dickeya dadantii Ech586, complete genomephosphotransferase KptA/Tpt13e-83307
NC_017047:2260118:227181322718132272385573Rahnella aquatilis HX2 chromosome, complete genomephosphotransferase KptA/Tpt14e-59227
NC_010498:4967724:498597049859704986554585Escherichia coli SMS-3-5, complete genomeRNA 2'-phosphotransferase2e-54211
NC_015379:4282815:429287342928734293457585Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative RNA 2-phosphotransferase9e-52202
NC_009656:44500:643006430064848549Pseudomonas aeruginosa PA7 chromosome, complete genomeRNA 2'-phosphotransferase-like protein7e-47186
NC_006350:845513:877250877250877804555Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative RNA 2'-phosphotransferase9e-42169
NC_013730:4857090:486585048658504866398549Spirosoma linguale DSM 74, complete genomephosphotransferase KptA/Tpt15e-40163
NC_009617:3926843:395018439501843950738555Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeRNA 2'-phosphotransferase-like protein1e-38159
NC_015873:1411718:143420214342021434765564Megasphaera elsdenii DSM 20460, complete genomeprobable RNA 2'-phosphotransferase4e-38157
NC_014958:1268559:128811512881151288675561Deinococcus maricopensis DSM 21211 chromosome, complete genomeRNA 2'-phosphotransferase1e-37155
NC_009012:3591687:359460935946093595157549Clostridium thermocellum ATCC 27405, complete genomephosphotransferase KptA/Tpt13e-36150
NC_016641:2618587:261858726185872619123537Paenibacillus terrae HPL-003 chromosome, complete genomeputative RNA 2'-phosphotransferase1e-32139
NC_009009:540992:553770553770554315546Streptococcus sanguinis SK36, complete genomeRNA:NAD 2'-phosphotransferase, putative9e-29126
NC_019673:7598026:761148176114817611996516Saccharothrix espanaensis DSM 44229 complete genomePhosphotransferase KptA/Tpt16e-29126
NC_012914:336750:357625357625358203579Paenibacillus sp. JDR-2, complete genomephosphotransferase KptA/Tpt15e-25114
NC_016935:7872425:791506179150617915645585Paenibacillus mucilaginosus 3016 chromosome, complete genomephosphotransferase KptA/Tpt11e-24112
NC_014654:302000:320914320914321459546Halanaerobium sp. 'sapolanicus' chromosome, complete genomephosphotransferase KptA/Tpt17e-24110
NC_015320:273979:293594293594294169576Archaeoglobus veneficus SNP6 chromosome, complete genomeRNA 2'-phosphotransferase1e-22105
NC_013741:302415:303393303393304016624Archaeoglobus profundus DSM 5631, complete genomephosphotransferase KptA/Tpt12e-21101
NC_000961:135493:138698138698139231534Pyrococcus horikoshii OT3, complete genomeRNA 2'-phosphotransferase8e-2096.7
NC_007951:4576825:459478145947814595098318Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-1685.1
NC_013741:838243:847922847922848554633Archaeoglobus profundus DSM 5631, complete genomephosphotransferase KptA/Tpt12e-1582
NC_019977:2375703:238291423829142383549636Methanomethylovorans hollandica DSM 15978, complete genomeRNA:NAD 2'-phosphotransferase2e-1478.2
NC_015416:2785514:278740527874052788049645Methanosaeta concilii GP-6 chromosome, complete genomeRNA 2'-phosphotransferase, Tpt1 / KptA family7e-1270.1
NC_008752:725189:730475730475730621147Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-0753.9
NC_014483:1604000:161190016119001612145246Paenibacillus polymyxa E681 chromosome, complete genomeRNA:NAD 2'-phosphotransferase4e-0650.8