Pre_GI: BLASTP Hits

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Query: NC_004547:3207776:3243722 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 3243722, End: 3245125, Length: 1404

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:2209288:2252468225246822539491482Escherichia coli ED1a chromosome, complete genomeputative mobilization protein1e-102373
NC_004547:1873390:1909271190927119107311461Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeprobable plasmid-related protein2e-94346
NC_011149:1987291:2004722200472220062271506Salmonella enterica subsp. enterica serovar Agona str. SL483,MobA/MobL family5e-92338
NC_016831:947281:9714039714039729231521Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative Conjugal transfer protein9e-89327
NC_011294:2053991:2070488207048820720081521Salmonella enterica subsp. enterica serovar Enteritidis strconjugal transfer protein1e-88327
NC_011205:2180598:2197505219750521990251521Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853MobA/MobL family protein1e-88327
NC_011274:2044000:2061616206161620631361521Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91Conjugal transfer protein1e-87323
NC_013716:2139952:2152084215208421535981515Citrobacter rodentium ICC168, complete genomeputative MobA/MobL family mobilization protein6e-87321
NC_008253:1938975:1954359195435919558611503Escherichia coli 536, complete genomehypothetical protein6e-84311
NC_004431:2185750:2201204220120422027061503Escherichia coli CFT073, complete genomehypothetical protein3e-83309
NC_016832:948029:9618499618499633601512Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,MobA/MobL4e-61236
NC_010338:359940:3722873722873751452859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA3e-34146
NC_010338:1216385:1217970121797012208282859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA3e-34146
NC_015675:5607297:5632354563235456354013048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA2e-32140
NC_014816:1592799:1592799159279915960233225Asticcacaulis excentricus CB 48 chromosome 1, complete sequenceti-type conjugative transfer relaxase traa7e-31135
NC_009445:6424000:6443614644361464466253012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA3e-30133
NC_009445:1316000:1316372131637213193262955Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA4e-30132
NC_012891:1277966:1292370129237012938541485Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,hypothetical protein1e-29130
NC_007958:4371125:4393639439363943967583120Rhodopseudomonas palustris BisB5, complete genomeMobA/MobL protein7e-29129
NC_009445:838281:8382818382818412923012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA3e-29129
NC_008435:1131242:1160526116052611635463021Rhodopseudomonas palustris BisA53, complete genomeMobA/MobL protein1e-28128
NC_007925:1085500:1087177108717710902813105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein2e-28127
NC_015224:3587500:360425036042503604741492Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative Conjugal transfer protein2e-28127
NC_009720:251703:2737272737272766572931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA3e-28126
NC_009720:2945655:2945655294565529485852931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA3e-28126
NC_014217:2760898:2762803276280327657602958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA1e-27124
NC_011991:65368:6536865368694384071Agrobacterium vitis S4 plasmid pAtS4b, complete sequenceTi-type conjugative transfer relaxase TraA2e-27124
NC_015508:296856:2968562968563006473792Agrobacterium sp. H13-3 chromosome linear, complete sequenceConjugal transfer protein traA8e-27122
NC_015675:4565500:4576462457646245795093048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA6e-27122
NC_014006:3124818:3167502316750231703452844Sphingobium japonicum UT26S chromosome 1, complete genomeconjugal transfer protein TraA1e-26121
NC_007925:138927:1633911633911664953105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein1e-26121
NC_009720:464078:4822914822914852482958Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA1e-26121
NC_009656:5505413:5514427551442755156501224Pseudomonas aeruginosa PA7 chromosome, complete genomemobilization protein2e-26120
NC_015259:3902136:3902136390213639042412106Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTi-type conjugative transfer relaxase TraA3e-26120
NC_014217:2020737:2020737202073720236942958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA5e-26119
NC_002678:763808:7856497856497886963048Mesorhizobium loti MAFF303099, complete genomeprobable conjugal transfer protein traA7e-26119
NC_014828:541874:5560295560295574741446Ethanoligenens harbinense YUAN-3 chromosome, complete genome2e-25117
NC_007802:3252300:3275866327586632772091344Jannaschia sp. CCS1, complete genomeMobA/MobL protein2e-24114
NC_016026:1224129:1241326124132612434102085Micavibrio aeruginosavorus ARL-13 chromosome, complete genomemobA/MobL family protein2e-24114
NC_015603:1:17117122312061Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequencenickase6e-24112
NC_016010:1822212:1878854187885418804971644Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeplasmid mobilization protein6e-24112
NC_007086:2887875:2907735290773529093781644Xanthomonas campestris pv. campestris str. 8004, complete genomeplasmid mobilization protein4e-23109
NC_011365:502620:5087915087915101941404Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeMobA/MobL protein6e-23108
NC_010125:2295500:2301968230196823033711404Gluconacetobacter diazotrophicus PAl 5, complete genomeputative mobilization protein A6e-23108
NC_013316:2033906:2054064205406420555151452Clostridium difficile R20291, complete genome2e-22107
NC_007508:1221500:1228615122861512306662052Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative MobA/MobL family protein7e-21102
NC_010688:1192410:1230572123057212321581587Xanthomonas campestris pv. campestris, complete genomeputative conjugal transfer protein6e-21102
NC_003919:3812778:3840055384005538416471593Xanthomonas axonopodis pv. citri str. 306, complete genomeplasmid mobilization protein4e-21102
NC_010688:3515885:3538586353858635401781593Xanthomonas campestris pv. campestris, complete genomeMobA/MobL family protein1e-20101
NC_017271:3641705:3666804366680436684141611Xanthomonas campestris pv. raphani 756C chromosome, completeMobA-MobL family protein6e-2099.4
NC_010510:339879:3631673631673647441578Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete1e-1997.8
NC_010688:3030873:3040681304068130422761596Xanthomonas campestris pv. campestris, complete genomeplasmid mobilization protein2e-1997.8
NC_017202:56000:7778377783798792097Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127,Nickase TraA6e-1995.9
NC_007508:1221500:1252752125275212543531602Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeMobA/MobL family protein7e-1892.4
NC_014727:1485656:149873614987361499374639Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,nickase, traa like protein3e-1790.1
NC_015977:3424178:3466782346678234680711290Roseburia hominis A2-183 chromosome, complete genomehypothetical protein8e-1789
NC_012781:700226:7232517232517248311581Eubacterium rectale ATCC 33656, complete genomeputative conjugal transfer protein1e-1688.2
NC_012781:2552723:2573928257392825755081581Eubacterium rectale ATCC 33656, complete genomeputative conjugal transfer protein1e-1688.2
NC_003919:1716831:1739162173916217407601599Xanthomonas axonopodis pv. citri str. 306, complete genomeplasmid mobilization protein4e-1686.7
NC_010688:3229820:3243901324390132455261626Xanthomonas campestris pv. campestris, complete genomeplasmid mobilization protein3e-1480.1
NC_015977:2920500:2926700292670029284211722Roseburia hominis A2-183 chromosome, complete genomeputative conjugal transfer protein8e-1479
NC_015977:2718437:2735594273559427373151722Roseburia hominis A2-183 chromosome, complete genomeputative conjugal transfer protein1e-1377.8
NC_013855:964000:9651729651729682163045Azospirillum sp. B510 plasmid pAB510a, complete sequencehypothetical protein1e-1274.7
NC_012796:1600600:1609788160978816126312844Desulfovibrio magneticus RS-1, complete genomeconjugal transfer protein TraA6e-1272.8
NC_010793:1695716:1704741170474117057571017Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA1e-1068.2
NC_007086:2887875:292775329277532928598846Xanthomonas campestris pv. campestris str. 8004, complete genomeplasmid mobilization protein2e-0964.3
NC_017028:1030000:103036510303651031309945Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeconjugal transfer protein TraA9e-0858.5
NC_009092:1127000:1144881114488111461731293Shewanella loihica PV-4, complete genomeMobA/MobL protein3e-0757.4
NC_010793:1468849:1475436147543614782402805Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA9e-0755.5
NC_010793:541040:5689105689105702081299Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA1e-0654.7
NC_010793:357000:3642693642693655851317Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA1e-0654.7
NC_007958:4371125:4378341437834143795851245Rhodopseudomonas palustris BisB5, complete genomeMobA/MobL protein2e-0654.3
NC_010793:1695716:1698219169821917002312013Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA2e-0653.9