Pre_GI: BLASTP Hits

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Query: NC_004547:1174650:1192339 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1192339, End: 1192806, Length: 468

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:1090000:110427611042761104698423Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein6e-47186
NC_010067:191190:205267205267205701435Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-31133
NC_011741:4570498:458620945862094586643435Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-30131
CU928160:4570498:458620945862094586643435Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein2e-30131
NC_009792:3665369:368501536850153685452438Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-30130
NC_009436:3117661:314023731402373140665429Enterobacter sp. 638, complete genomehypothetical protein6e-30129
NC_012880:3421500:343440034344003434828429Dickeya dadantii Ech703, complete genomehypothetical protein8e-30129
NC_011094:2791719:281060128106012811023423Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-22105
NC_009801:2898426:292878829287882929213426Escherichia coli E24377A, complete genomehypothetical protein2e-2098.2