Pre_GI: BLASTP Hits

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Query: NC_004463:1717890:1744328 Bradyrhizobium japonicum USDA 110, complete genome

Start: 1744328, End: 1745299, Length: 972

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017249:8510121:854888385488838549854972Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein7e-168589
NC_009485:3461051:347839734783973479329933Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein9e-139493
NC_009668:1726000:174400517440051744862858Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceKu family containing protein1e-55216
NC_007722:851129:853650853650854486837Erythrobacter litoralis HTCC2594, complete genomehypothetical protein5e-53208
NC_009668:1726000:174068217406821741482801Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceKu family containing protein4e-47188
NC_011071:10842:301393013931044906Stenotrophomonas maltophilia R551-3, complete genomeKu protein5e-37155
NC_015138:3022414:3038470303847030396001131Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeKu protein9e-36150
NC_015690:8019859:804219880421988043067870Paenibacillus mucilaginosus KNP414 chromosome, complete genomeCytochrome c heme-binding site protein4e-35149
NC_019673:4687289:469390646939064694802897Saccharothrix espanaensis DSM 44229 complete genomeputative DNA repair protein, Ku family4e-35148
NC_009142:4046376:406180640618064062726921Saccharopolyspora erythraea NRRL 2338, complete genomeDNA binding protein, Ku-like7e-34144
NC_010001:2125500:212795621279562128729774Clostridium phytofermentans ISDg, complete genomeKu protein4e-33142
NC_008782:2683989:2687648268764826886911044Acidovorax sp. JS42, complete genomeKu domain protein8e-33141
NC_011992:1381843:1396768139676813978111044Acidovorax ebreus TPSY, complete genomeKu protein2e-32140
NC_015573:997629:101067110106711011540870Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDNA repair protein9e-32137
NC_009142:7820251:782397278239727824727756Saccharopolyspora erythraea NRRL 2338, complete genomesecreted protein2e-30132
NC_003155:3652587:3693749369374936948491101Streptomyces avermitilis MA-4680, complete genomeKu70/Ku80 protein2e-28126
NC_002944:865425:898252898252899160909Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein7e-28124
NC_019673:4687289:469299246929924693786795Saccharothrix espanaensis DSM 44229 complete genomeputative DNA repair protein, Ku family2e-27123
NC_015416:2723189:274331627433162744167852Methanosaeta concilii GP-6 chromosome, complete genomeKu protein6e-25115
NC_012522:7596039:763526976352697636162894Rhodococcus opacus B4, complete genomeDNA end-binding protein Ku2e-23110
NC_013131:3303337:331044433104443311268825Catenulispora acidiphila DSM 44928, complete genomeKu protein2e-23109
NC_015216:2422758:242693124269312427695765Methanobacterium sp. AL-21 chromosome, complete genomeKu domain-containing protein8e-2097.8