Pre_GI: BLASTP Hits

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Query: NC_004347:4211241:4233959 Shewanella oneidensis MR-1, complete genome

Start: 4233959, End: 4236439, Length: 2481

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009092:2589000:2599683259968326021422460Shewanella loihica PV-4, complete genomeIg domain protein, group 1 domain protein4e-54213
NC_008789:350650:3554523554523574071956Halorhodospira halophila SL1, complete genomehypothetical protein3e-41171
NC_008781:708811:7205287205287224441917Polaromonas naphthalenivorans CJ2, complete genomehypothetical protein2e-22108
NC_007912:3403101:3421590342159034226901101Saccharophagus degradans 2-40, complete genomeCarbamoyl-phosphate synthase, large subunit, glutamine-dependent2e-21105