Pre_GI: BLASTP Hits

Some Help

Query: NC_004347:4211241:4218385 Shewanella oneidensis MR-1, complete genome

Start: 4218385, End: 4219182, Length: 798

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009665:593359:607811607811608488678Shewanella baltica OS185 chromosome, complete genomepentapeptide repeat-containing protein1e-83309
NC_009052:4437649:444095244409524441614663Shewanella baltica OS155, complete genomepentapeptide repeat protein2e-83308
NC_013722:1689125:175102617510261751628603Xanthomonas albilineans, complete genomemcbg like protein; putative albicidin resistance4e-41168
NC_003552:576500:588926588926589444519Methanosarcina acetivorans C2A, complete genomeantibiotic resistance protein McbG9e-22103
NC_015167:1701118:170527217052721705841570Cellulophaga lytica DSM 7489 chromosome, complete genomepentapeptide repeat protein4e-21102
NC_013037:1015210:102602410260241026668645Dyadobacter fermentans DSM 18053, complete genomepentapeptide repeat protein4e-2098.6
NC_018748:1311465:133217413321741332749576Emticicia oligotrophica DSM 17448 chromosome, complete genomepentapeptide repeat protein4e-1892
NC_010803:1573849:157889815788981579479582Chlorobium limicola DSM 245, complete genomepentapeptide repeat protein9e-1890.9
NC_012881:3727150:372996537299653730546582Desulfovibrio salexigens DSM 2638, complete genomepentapeptide repeat protein2e-1685.9
NC_020126:6791726:679172667917266792394669Myxococcus stipitatus DSM 14675, complete genomepentapeptide repeat-containing protein3e-1685.9
NC_017093:2357583:236116723611672361754588Actinoplanes missouriensis 431, complete genomehypothetical protein3e-0859.3
NC_016641:1148220:116637511663751166983609Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein6e-0858.2
NC_016641:2394628:241582424158242416429606Paenibacillus terrae HPL-003 chromosome, complete genomepentapeptide repeat-containing protein1e-0757
NC_010557:1030319:103540510354051035908504Burkholderia ambifaria MC40-6 chromosome 3, complete sequencepentapeptide repeat protein2e-0756.6
NC_014622:5378000:539812353981235398731609Paenibacillus polymyxa SC2 chromosome, complete genomepentapeptide repeat-containing protein2e-0756.6
NC_014391:4617688:463064646306464631278633Micromonospora aurantiaca ATCC 27029 chromosome, complete genomepentapeptide repeat protein5e-0755.1
NC_003143:524755:5455155455155471371623Yersinia pestis CO92, complete genomehypothetical protein1e-0653.5
NC_019964:3028469:3034568303456830364721905Halovivax ruber XH-70, complete genomeputative low-complexity protein4e-0652.4
NC_013956:3273340:328664832866483287568921Pantoea ananatis LMG 20103 chromosome, complete genomeYjcF4e-0652
NC_015663:4129685:4132881413288141354212541Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein7e-0651.2
NC_016816:1852659:1852659185265918551992541Pantoea ananatis LMG 5342, complete genomehypothetical protein9e-0650.8