Pre_GI: BLASTP Hits

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Query: NC_004337:3590323:3849249 Shigella flexneri 2a str. 301, complete genome

Start: 3849249, End: 3849971, Length: 723

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009648:4497749:451930645193064520025720Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative 6-phosphogluconolactonase2e-92338
NC_013517:1014000:103221310322131032929717Sebaldella termitidis ATCC 33386, complete genomeglucosamine/galactosamine-6-phosphate isomerase1e-65249
NC_004193:375416:639057639057639809753Oceanobacillus iheyensis HTE831, complete genomeN-acetylglucosamine-6-phosphate isomerase6e-23107
NC_008262:2649289:264928926492892650017729Clostridium perfringens SM101, complete genomeglucosamine-6-phosphate isomerase9e-1890.5
NC_004557:2777291:277878827787882779513726Clostridium tetani E88, complete genomeglucosamine-6-phosphate deaminase6e-1787.8
NC_019960:1272956:131431113143111315099789Prevotella dentalis DSM 3688 chromosome 1, complete sequenceglucosamine-6-phosphate isomerase7e-1684.3
NC_008054:1815723:183823418382341838938705Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeGlucosamine-6-phosphate deaminase4e-1478.2
NC_012781:2802000:280921628092162810124909Eubacterium rectale ATCC 33656, complete genomeglucosamine-6-phosphate deaminase6e-1477.8
NC_014363:1902868:192448919244891925223735Olsenella uli DSM 7084 chromosome, complete genomeglucosamine-6-phosphate isomerase1e-1377
NC_014933:3856561:386859838685983869335738Bacteroides helcogenes P 36-108 chromosome, complete genomegalactosamine 6-phosphate isomerase AgaI2e-1376.3
NC_011899:2481229:250297625029762503701726Halothermothrix orenii H 168, complete genomeglucosamine-6-phosphate isomerase5e-1374.7
NC_014934:3218423:3218423321842332213032881Cellulophaga algicola DSM 14237 chromosome, complete genome9e-1373.9
NC_014829:3964616:397812739781273978852726Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeglucosamine-6-phosphate isomerase1e-1273.6
NC_015519:488550:501485501485502219735Tepidanaerobacter sp. Re1 chromosome, complete genomeglucosamine-6-phosphate deaminase5e-1271.2
NC_010163:285710:295843295843296565723Acholeplasma laidlawii PG-8A chromosome, complete genomeglucosamine-6-phosphate deaminase9e-1270.5
NC_010718:2977021:299443729944372995177741Natranaerobius thermophilus JW/NM-WN-LF, complete genomeglucosamine-6-phosphate isomerase3e-1168.9
NC_013730:296312:298781298781299512732Spirosoma linguale DSM 74, complete genomeglucosamine/galactosamine-6-phosphate isomerase3e-1168.9
NC_014632:1404000:140957014095701410403834Ilyobacter polytropus DSM 2926 chromosome, complete genomeglucosamine-6-phosphate deaminase4e-1168.2
NC_008593:640000:655331655331656056726Clostridium novyi NT, complete genomeglucosamine-6-phosphate isomerase4e-1168.2
NC_015433:791364:797826797826798530705Streptococcus suis ST3 chromosome, complete genomeglucosamine-6-phosphate isomerase7e-1167.8
NC_009348:3029963:303171530317153032515801Aeromonas salmonicida subsp. salmonicida A449, complete genomeglucosamine-6-phosphate deaminase9e-1167.4
NC_006322:717953:731380731380732108729Bacillus licheniformis ATCC 14580, complete genomeNagB1e-1066.6
NC_006270:718169:731597731597732325729Bacillus licheniformis ATCC 14580, complete genomeN-acetylglucosamine-6-phosphate isomerase1e-1066.6
NC_015697:33665:532545325453964711Lactobacillus reuteri SD2112 chromosome, complete genomeglucosamine-6-phosphate deaminase2e-1065.9
NC_015291:665714:687940687940688647708Streptococcus oralis Uo5, complete genomeN-acetylglucosamine-6-phosphate isomerase4e-1065.1
NC_014364:2562281:257897425789742579708735Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeGlucosamine-6-phosphate deaminase8e-1064.3
NC_006677:1596560:160917816091781609525348Gluconobacter oxydans 621H, complete genomeGlucosamine-6-phosphate deaminase2e-0962.8
NC_009513:1065704:108287710828771083581705Lactobacillus reuteri F275, complete genomeglucosamine/galactosamine-6-phosphate isomerase3e-0962
NC_019960:1272956:1315137131513713171281992Prevotella dentalis DSM 3688 chromosome 1, complete sequence6-phosphogluconolactonase/glucosamine-6- phosphate isomerase/deaminase7e-0960.8
NC_014618:4657719:465771946577194658462744Enterobacter cloacae SCF1 chromosome, complete genomeglucosamine-6-phosphate isomerase1e-0860.5
NC_005027:1304887:132256313225631323318756Rhodopirellula baltica SH 1, complete genomeglucosamine-6-phosphate isomerase1e-0860.5
NC_019892:9207246:922476892247689225565798Singulisphaera acidiphila DSM 18658 chromosome, complete genome6-phosphogluconolactonase/glucosamine-6- phosphate isomerase/deaminase2e-0859.3
NC_015311:2235550:2236920223692022389081989Prevotella denticola F0289 chromosome, complete genomeglucosamine-6-phosphate deaminase-like protein8e-0857.4
NC_008319:1950889:197380619738061974531726Synechococcus sp. CC9311, complete genomeglucosamine-6-phosphate isomerase1e-0653.5
NC_017030:8766757:878103787810378781774738Corallococcus coralloides DSM 2259 chromosome, complete genomeglucosamine-6-phosphate isomerase5e-0651.6