Pre_GI: BLASTP Hits

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Query: NC_004337:3590323:3659287 Shigella flexneri 2a str. 301, complete genome

Start: 3659287, End: 3661596, Length: 2310

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011740:1189455:1202813120281312049602148Escherichia fergusonii ATCC 35469, complete genomeregulator of cellulose synthase, cyclic di-GMP binding0871
NC_015723:1448000:1473441147344114757652325Cupriavidus necator N-1 chromosome 2, complete sequencecellulose synthase subunit B7e-109395
NC_010551:1412139:1428493142849314307872295Burkholderia ambifaria MC40-6 chromosome 1, complete sequencecellulose synthase subunit B2e-106387
NC_016027:3038943:3057454305745430620194566Gluconacetobacter xylinus NBRC 3288, complete genomecellulose synthase catalytic subunit1e-75285
NC_016631:2583762:2598130259813026024974368Granulicella mallensis MP5ACTX8 chromosome, complete genomecellulose synthase catalytic subunit5e-52206
NC_009089:1202261:1203540120354012056212082Clostridium difficile 630, complete genomeputative cell wall anchored protein3e-0757.8
NC_013316:1081044:1082323108232310844042082Clostridium difficile R20291, complete genomeputative cell wall anchored protein9e-0756.2