Pre_GI: BLASTP Hits

Some Help

Query: NC_004129:5481629:5487576 Pseudomonas fluorescens Pf-5, complete genome

Start: 5487576, End: 5487755, Length: 180

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021150:201237:221650221650221937288Azotobacter vinelandii CA6, complete genomehypothetical protein4e-0753.5
NC_012560:201237:221650221650221937288Azotobacter vinelandii DJ, complete genomehypothetical protein4e-0753.5
NC_011283:3379181:338266433826643382849186Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein9e-0752.4
NC_013850:3340882:334146633414663341651186Klebsiella variicola At-22 chromosome, complete genomeStress-induced protein, KGG, repeat protein9e-0752.4
NC_010473:1384000:140327614032761403455180Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein2e-0651.2
AP010958:1472506:149275114927511492930180Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein2e-0651.2
NC_011353:1761977:178389017838901784069180Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-0651.2
NC_013008:1761165:178286617828661783045180Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-0651.2
NC_013353:1472506:149275114927511492930180Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-0651.2
NC_013361:1754346:177600517760051776184180Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-0651.2
NC_002655:2264773:227009822700982270301204Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-0651.2
NC_013941:1613595:162895716289571629160204Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-0651.2
NC_020063:2785652:279276327927632792939177Enterobacteriaceae bacterium strain FGI 57, complete genomestress-induced acidophilic repeat motif-containing protein4e-0650.1