Pre_GI: BLASTP Hits

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Query: NC_004129:5481629:5481629 Pseudomonas fluorescens Pf-5, complete genome

Start: 5481629, End: 5482561, Length: 933

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020541:1510782:152745915274591528289831Rhodanobacter sp. 2APBS1, complete genomehypothetical protein2e-45182
NC_011761:2344408:235988923598892360626738Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein1e-35150
NC_011206:2239109:225459022545902255327738Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotein of unknown function DUF721e-35150
NC_014720:154111:194033194033194776744Caldicellulosiruptor kronotskyensis 2002 chromosome, completehypothetical protein1e-31137
NC_018581:32092:409624096241711750Gordonia sp. KTR9 chromosome, complete genomehypothetical protein2e-26119
NC_015177:124000:126548126548127267720Pedobacter saltans DSM 12145 chromosome, complete genomeprotein of unknown function DUF725e-26118
NC_014960:216965:232552232552233295744Anaerolinea thermophila UNI-1, complete genomehypothetical protein3e-25115
NC_012440:585568:607714607714608436723Persephonella marina EX-H1, complete genomehypothetical protein3e-24112
NC_001263:531188:547773547773548570798Deinococcus radiodurans R1 chromosome 1, complete sequencehypothetical protein5e-22105
NC_015381:2859000:286206728620672862837771Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein1e-1997.4
NC_010322:3315024:332114133211413321866726Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein7e-1994.7
NC_017150:1406793:140858314085831409338756Acetobacter pasteurianus IFO 3283-01-42C, complete genomehypothetical protein9e-1994.4
NC_017146:1407804:140959414095941410349756Acetobacter pasteurianus IFO 3283-26, complete genomehypothetical protein9e-1994.4
NC_017125:1407804:140959414095941410349756Acetobacter pasteurianus IFO 3283-22, complete genomehypothetical protein9e-1994.4
NC_017121:1406787:140857714085771409332756Acetobacter pasteurianus IFO 3283-07, complete genomehypothetical protein9e-1994.4
NC_017111:1406787:140857714085771409332756Acetobacter pasteurianus IFO 3283-32, complete genomehypothetical protein9e-1994.4
NC_017108:1406787:140857714085771409332756Acetobacter pasteurianus IFO 3283-12, complete genomehypothetical protein9e-1994.4
NC_017100:1407804:140959414095941410349756Acetobacter pasteurianus IFO 3283-03, complete genomehypothetical protein9e-1994.4
NC_013209:1406793:140858314085831409338756Acetobacter pasteurianus IFO 3283-01, complete genomehypothetical protein9e-1994.4
NC_012803:691215:719033719033719689657Micrococcus luteus NCTC 2665, complete genomehypothetical protein2e-1893.2
NC_015161:84526:947099470995461753Deinococcus proteolyticus MRP chromosome, complete genomehypothetical protein6e-1788.2
NC_010510:139685:139685139685140455771Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeprotein of unknown function DUF721e-1687
NC_011831:4043802:404380240438024044656855Chloroflexus aggregans DSM 9485, complete genomeprotein of unknown function DUF724e-1479
NC_015510:6653159:6656268665626866572991032Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomehypothetical protein7e-1374.7
NC_015577:2143477:215936421593642160167804Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein2e-1273.6
NC_015577:1392390:140947514094751410308834Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein5e-1272
NC_009767:2866668:289419428941942895075882Roseiflexus castenholzii DSM 13941, complete genomeprotein of unknown function DUF721e-1170.5
NC_012808:1122341:114805911480591148814756Methylobacterium extorquens AM1, complete genomehypothetical protein4e-1169.3
NC_015578:3410367:342890434289043429707804Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein2e-1067
NC_018748:2119679:214130421413042142212909Emticicia oligotrophica DSM 17448 chromosome, complete genomeprotein of unknown function DUF723e-1065.9
NC_015578:2191000:220665922066592207462804Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein6e-1065.1
NC_011757:1532047:153472015347201535475756Methylobacterium chloromethanicum CM4, complete genomeprotein of unknown function DUF722e-0963.5
NC_012988:1777618:179995717999571800616660Methylobacterium extorquens DM4, complete genomehypothetical protein2e-0963.2
NC_005027:4180502:418446241844624185385924Rhodopirellula baltica SH 1, complete genomehypothetical protein4e-0962.4
NC_007517:344237:352593352593352904312Geobacter metallireducens GS-15, complete genomehypothetical protein9e-0961.2
NC_009654:4253431:425557942555794256442864Marinomonas sp. MWYL1, complete genomehypothetical protein5e-0858.5
NC_012856:798922:8130578130578141421086Ralstonia pickettii 12D chromosome 1, complete genomeprotein of unknown function DUF721e-0757.4
NC_010634:2297000:231661023166102317425816Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-0653.9
NC_009348:3029963:306470130647013065576876Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein2e-0653.5
NC_008150:1593500:161406016140601614875816Yersinia pestis Antiqua, complete genomehypothetical protein2e-0653.1