Pre_GI: BLASTP Hits

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Query: NC_004129:4093610:4112000 Pseudomonas fluorescens Pf-5, complete genome

Start: 4112000, End: 4112461, Length: 462

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:2417312:241976824197682420202435Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative acetyltransferase1e-43175
NC_016830:3869572:386957238695723870006435Pseudomonas fluorescens F113 chromosome, complete genomegcn5-related n-acetyltransferase8e-43172
NC_015733:3923800:394016639401663940603438Pseudomonas putida S16 chromosome, complete genomeGCN5-like N-acetyltransferase2e-35147
NC_014500:2402881:241147924114792411931453Dickeya dadantii 3937 chromosome, complete genomeTPR repeat protein5e-1580.1
NC_008321:2190000:219841121984112198833423Shewanella sp. MR-4, complete genomeGCN5-related N-acetyltransferase2e-1477.8
NC_018868:2458122:246628324662832466702420Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeGCN5-related N-acetyltransferase3e-1477
NC_002506:370629:375613375613376131519Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeacetyltransferase, putative4e-1270.5
NC_009456:787322:903860903860904378519Vibrio cholerae O395 chromosome 1, complete sequenceputative acetyltransferase4e-1270.5
NC_016945:370471:375515375515375925411Vibrio cholerae IEC224 chromosome II, complete sequenceacetyltransferase5e-1270.1
NC_015383:229036:233714233714234151438Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequenceacetyltransferase GNAT family protein3e-0960.5
NC_006351:2759708:279670427967042797141438Burkholderia pseudomallei K96243 chromosome 2, complete sequenceacetyltransferase (GNAT) family protein1e-0858.9
NC_012917:3198000:320785032078503208311462Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeGCN5-related N-acetyltransferase3e-0857.8
NC_015556:2265940:229047722904772291028552Pseudomonas fulva 12-X chromosome, complete genomeGCN5-related N-acetyltransferase6e-0649.7