Pre_GI: BLASTP Hits

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Query: NC_004129:2201780:2218181 Pseudomonas fluorescens Pf-5, complete genome

Start: 2218181, End: 2218525, Length: 345

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:3849835:385404038540403854399360Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein8e-46181
NC_005773:2177184:219051521905152190874360Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein3e-44176
NC_002947:3404000:342404734240473424409363Pseudomonas putida KT2440, complete genomepyocin R2_PP, conserved hypothetical protein9e-41165
NC_017986:5509569:552854655285465528914369Pseudomonas putida ND6 chromosome, complete genomehypothetical protein1e-40164
NC_016830:5031819:503828850382885038647360Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein4e-28123