Pre_GI: BLASTP Hits

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Query: NC_004129:1848701:1852291 Pseudomonas fluorescens Pf-5, complete genome

Start: 1852291, End: 1852734, Length: 444

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007492:1735595:173607517360751736512438Pseudomonas fluorescens PfO-1, complete genomeFlagellar biosynthesis protein, FliO2e-31134
NC_010501:4080937:409772240977224098177456Pseudomonas putida W619, complete genomeflagellar biosynthesis protein FliO5e-28122
NC_002947:4931476:494841249484124948846435Pseudomonas putida KT2440, complete genomeflagellar assembly protein FliO1e-25114
NC_009512:1691930:169541516954151695849435Pseudomonas putida F1, complete genomeflagellar biosynthesis protein, FliO5e-25113
NC_017986:4374979:437845243784524378898447Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis protein, FliO5e-25113
NC_013851:3300278:331146533114653311896432Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar biosynthetic protein FliO4e-0650.4