Pre_GI: BLASTP Hits

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Query: NC_004088:1801819:1820619 Yersinia pestis KIM, complete genome

Start: 1820619, End: 1820855, Length: 237

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005810:2613456:261539326153932616262870Yersinia pestis biovar Microtus str. 91001, complete genomegluconate 5-dehydrogenase2e-24110
NC_008149:2411161:241309824130982413967870Yersinia pestis Nepal516, complete genomegluconate 5-dehydrogenase2e-24110
NC_010634:2960000:296061529606152961484870Yersinia pseudotuberculosis PB1/+, complete genomeshort-chain dehydrogenase/reductase SDR6e-24109
NC_010465:1724000:174283017428301743699870Yersinia pseudotuberculosis YPIII, complete genomeshort-chain dehydrogenase/reductase SDR2e-23107