Pre_GI: BLASTP Hits

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Query: NC_003911:253400:263730 Silicibacter pomeroyi DSS-3, complete genome

Start: 263730, End: 263805, Length: 76

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008043:615049:62398162398162405676Silicibacter sp. TM1040 mega plasmid, complete sequencetRNA-Ala9e-0648.9
NC_003911:3453764:34657373465737346581276Silicibacter pomeroyi DSS-3, complete genometRNA-Ala9e-0648.9
NC_008043:499399:50772950772950780476Silicibacter sp. TM1040 mega plasmid, complete sequencetRNA-Ala9e-0648.9
NC_003911:4001094:40140744014074401414976Silicibacter pomeroyi DSS-3, complete genometRNA-Ala9e-0648.9
NC_008044:136844:14669814669814677376Silicibacter sp. TM1040, complete genometRNA-Ala9e-0648.9
NC_008043:167108:17693217693217700776Silicibacter sp. TM1040 mega plasmid, complete sequencetRNA-Ala9e-0648.9