Pre_GI: BLASTP Hits

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Query: NC_003552:2133590:2151010 Methanosarcina acetivorans C2A, complete genome

Start: 2151010, End: 2151447, Length: 438

Host Lineage: Methanosarcina acetivorans; Methanosarcina; Methanosarcinaceae; Methanosarcinales; Euryarchaeota; Archaea

General Information: This wild-type strain (C2A; DSM2834) is the type strain of this species and was isolated from marine sediment. Anaerobic methane-producing archeon. This organism is a strictly anaerobic, nonmotile, methane-producing Archaea responsible for virtually all biogenic methane production, a process of critical importance as a key step in the global carbon cycle. This process results in the production of significant amounts of greenhouse gas. This organism is also important in production of alternative fuels and plays a role in both agricultural and waste treatment industry. Optimal growth occurs at pH 6.5-7.0.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007355:2838952:285914428591442859569426Methanosarcina barkeri str. fusaro chromosome 1, complete sequencetranscriptional regulator, CopG family1e-36151
NC_015416:2113949:213483821348382135245408Methanosaeta concilii GP-6 chromosome, complete genomeCopG family transcriptional regulator5e-35146
NC_000909:467607:485578485578486003426Methanocaldococcus jannaschii DSM 2661, complete genomenickel responsive regulator2e-28124
NC_013156:728397:748013748013748438426Methanocaldococcus fervens AG86, complete genometranscriptional regulator NikR, CopG family6e-28122
NC_015680:369777:385309385309385725417Pyrococcus yayanosii CH1 chromosome, complete genometranscription nickel responsive regulator (nikR)6e-23106
NC_019942:987134:103530410353041035708405Aciduliprofundum sp. MAR08-339, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain1e-2098.6
NC_000868:1386592:139771213977121398128417Pyrococcus abyssi GE5, complete genomenickel responsive regulator3e-1993.6
NC_004917:340997:341634341634342065432Helicobacter hepaticus ATCC 51449, complete genomenickel responsive regulator2e-1890.9
NC_006396:2025500:203044520304452030855411Haloarcula marismortui ATCC 43049 chromosome I, complete sequencetranscriptional regulator CopG family3e-1890.5
NC_011146:4070000:407565140756514076070420Geobacter bemidjiensis Bem, complete genomeputative transcriptional regulator, CopG family1e-1788.6
NC_008212:2978786:299626729962672996806540Haloquadratum walsbyi DSM 16790, complete genometranscription regulator; probably nickel responsive regulator3e-1787
NC_019978:315346:320567320567320980414Halobacteroides halobius DSM 5150, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain1e-1685.5
NC_012912:242709:263936263936264355420Dickeya zeae Ech1591, complete genometranscriptional regulator NikR, CopG family4e-1580.1
NC_019940:3089884:310346431034643103886423Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator6e-1579.3
NC_013508:275081:292753292753293199447Edwardsiella tarda EIB202, complete genomenickel responsive regulator5e-1476.3
NC_008340:2272692:228003322800332280452420Alkalilimnicola ehrlichei MLHE-1, complete genomeputative transcriptional regulator, CopG family5e-1373.2
NC_012779:261438:275788275788276225438Edwardsiella ictaluri 93-146, complete genomenickel-responsive transcriptional regulator NikR, putative1e-1271.6
NC_004741:4160500:418449041844904184891402Shigella flexneri 2a str. 2457T, complete genomenickel responsive regulator2e-1167.8
NC_015562:436128:451651451651452046396Methanotorris igneus Kol 5 chromosome, complete genometranscriptional regulator NikR1e-1065.1
NC_020388:1582817:158833215883321588721390Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator3e-1063.9
NC_014729:1908086:191297319129731913380408Halogeometricum borinquense DSM 11551 chromosome, complete genometranscriptional regulator with copg/arc/metj DNA-binding domain and metal-binding domain9e-1062.4
NC_013887:407771:419348419348419731384Methanocaldococcus sp. FS406-22 chromosome, complete genometranscriptional regulator NikR, CopG family9e-1062.4
NC_013959:83992:101591101591102100510Sideroxydans lithotrophicus ES-1 chromosome, complete genometranscriptional regulator NikR, CopG family2e-0961.2
NC_020388:1428042:143786614378661438255390Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator2e-0961.2
NC_013964:161105:169317169317169745429Haloferax volcanii DS2 plasmid pHV3, complete sequenceRibbon-helix-helix protein, copG family domain protein3e-0960.5
NC_019974:2421422:243945524394552439892438Natronococcus occultus SP4, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain4e-0960.1
NC_020388:1582817:159309715930971593525429Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator5e-0959.7
NC_000909:67729:737997379974182384Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein7e-0959.3
NC_020388:1582817:158544315854431585907465Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator4e-0857
NC_013156:381910:396265396265396645381Methanocaldococcus fervens AG86, complete genometranscriptional regulator NikR, CopG family4e-0856.6
NC_008701:168662:184589184589184987399Pyrobaculum islandicum DSM 4184, complete genomeputative transcriptional regulator, CopG family3e-0753.9
NC_019962:1875952:189258418925841892991408Natrinema pellirubrum DSM 15624, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain4e-0753.5
NC_013887:1383127:138587513858751386282408Methanocaldococcus sp. FS406-22 chromosome, complete genomeputative transcriptional regulator, CopG family5e-0753.1
NC_016070:167362:187502187502187894393Thermoproteus tenax Kra 1, complete genomeCopG/MetJ family transcriptional regulator5e-0753.1
NC_006396:1097000:110280211028021103221420Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceputative nickel responsive regulator7e-0752.8
NC_007520:1940120:196002519600251960498474Thiomicrospira crunogena XCL-2, complete genomeputative transcriptional regulator, CopG family4e-0650.1