Pre_GI: BLASTP Hits

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Query: NC_003198:3855157:3869661 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3869661, End: 3870046, Length: 386

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:3853036:385923638592363859640405Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein4e-29126
NC_012125:3905782:391198239119823912386405Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein1e-28124
NC_006905:3913988:391719239171923917596405Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein1e-28124
NC_006511:3759550:376688137668813767285405Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-28123
NC_011083:3985618:399295839929583993362405Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein8e-28122
NC_016857:3993864:400006340000634000467405Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein8e-28122
NC_017046:3991551:399889039988903999294405Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein8e-28122
NC_011149:3895921:390330639033063903665360Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein1e-1995.5
NC_011080:3941909:394815439481543948513360Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein1e-1995.5
NC_010102:3919999:392688839268883927247360Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-1992.8
NC_003197:3971905:397879439787943979153360Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein2e-1890.9
NC_016810:3993863:400010740001074000466360Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-1890.9
NC_016856:3985597:399248639924863992845360Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein2e-1890.9
NC_016860:3995445:400169040016904002049360Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein2e-1890.9
NC_016863:3933848:394009339400933940452360Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein2e-1890.9
NC_012912:4167429:418474241847424185101360Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF10444e-1373.2
NC_014837:1144500:115997111599711160330360Pantoea sp. At-9b chromosome, complete genomehypothetical protein1e-1168.9
NC_013941:4470932:451580045158004516153354Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-0961.2
NC_013008:4643825:468745246874524687805354Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-0961.2
NC_011353:4688000:473141147314114731764354Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-0961.2
NC_002655:4653160:469729046972904697643354Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-0961.2
NC_002695:4584177:462830746283074628660354Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-0961.2