Pre_GI: BLASTP Hits

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Query: NC_003198:2769449:2779174 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 2779174, End: 2779416, Length: 243

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004631:2755306:276503127650312765273243Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-41167
NC_016832:2743801:275243527524352752572138Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-2097.1
NC_011149:2829811:283468528346852834816132Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein5e-1992.8
NC_016831:2779864:278850627885062788643138Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-1580.5
NC_011083:2847318:290072629007262900863138Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,6e-1579.3
NC_011080:2897977:290285629028562902993138Salmonella enterica subsp. enterica serovar Newport str. SL254,6e-1579.3
NC_012125:2826624:286143828614382861569132Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-1475.5