Pre_GI: BLASTP Hits

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Query: NC_003198:1908238:1923279 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1923279, End: 1924067, Length: 789

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008563:1475500:147601014760101476870861Escherichia coli APEC O1, complete genomehypothetical protein4e-143507
NC_002695:1929215:193046519304651931253789Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-140499
NC_002655:2142587:215591221559122156700789Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933R1e-140499
CP002516:2580774:259603625960362596893858Escherichia coli KO11, complete genomeputative Rac prophage protein2e-54212
NC_016902:2580774:259603625960362596893858Escherichia coli KO11FL chromosome, complete genomeputative Rac prophage protein2e-54212
NC_010473:1493983:150853915085391509396858Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; conserved protein2e-54212
NC_000913:1404000:141914314191431420000858Escherichia coli K12, complete genomeRac prophage; conserved protein2e-54212
AC_000091:1407693:142283314228331423690858Escherichia coli W3110 DNA, complete genomehypothetical protein2e-54212
NC_011415:1472500:148435814843581485215858Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-54212
NC_012759:1296000:131120213112021312059858Escherichia coli BW2952 chromosome, complete genomeRac prophage protein2e-54212
CP002185:1493280:150895715089571509814858Escherichia coli W, complete genomeRac prophage; conserved protein2e-54212
NC_007712:2028500:203902820390282040014987Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-49195
NC_011283:4212000:421922242192224220076855Klebsiella pneumoniae 342 chromosome, complete genomephage replication protein O2e-1996.3
NC_017046:2756000:276522027652202766104885Salmonella enterica subsp. enterica serovar Typhimurium str. 798Gifsy-2 replication Protein O4e-1788.6
NC_016856:2812905:281968928196892820573885Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sphage replication protein O4e-1788.6
NC_011080:2761403:276818727681872769071885Salmonella enterica subsp. enterica serovar Newport str. SL254,replication protein O4e-1788.6
NC_012751:942315:978497978497979402906Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completephage replication protein8e-1787.8
NC_020063:2565605:258198225819822582881900Enterobacteriaceae bacterium strain FGI 57, complete genomephage replication protein O1e-1480.5
NC_010645:406794:417177417177418001825Bordetella avium 197N, complete genomehypothetical protein6e-1477.8
NC_002927:3716894:374964637496463750470825Bordetella bronchiseptica RB50, complete genomehypothetical protein1e-1067
NC_002927:2338549:234915823491582349982825Bordetella bronchiseptica RB50, complete genomehypothetical protein1e-1067
NC_014640:4951076:495743949574394958269831Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein3e-1065.9