Pre_GI: BLASTP Hits

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Query: NC_003198:1908238:1913065 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1913065, End: 1913406, Length: 342

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:3182576:318582331858233186164342Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage holin, lambda family5e-46182
NC_010102:683444:708282708282708611330Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-32136
NC_003197:2327474:233719823371982337527330Salmonella typhimurium LT2, complete genomeputative inner membrane protein5e-32136
NC_011083:2375061:238477823847782385107330Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,phage holin, lambda family5e-32136
NC_016810:2325190:233491423349142335243330Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage holin, lambda family5e-32136
NC_016856:2379027:238875123887512389080330Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein5e-32136
NC_016857:2325190:233491423349142335243330Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein5e-32136
NC_016860:2323017:233274123327412333070330Salmonella enterica subsp. enterica serovar Typhimurium strphage holin, lambda family protein5e-32136
NC_016863:2324293:233694323369432337272330Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein5e-32136
NC_017046:2324554:233427823342782334607330Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage holin, lambda family5e-32136
NC_013961:3413011:342446934244693424867399Erwinia amylovora, complete genomeHolin (Lysis protein 13)3e-25113
NC_014838:218000:237894237894238232339Pantoea sp. At-9b plasmid pPAT9B01, complete sequencephage holin, lambda family2e-24110
NC_013971:335247:346521346521346913393Erwinia amylovora ATCC 49946 chromosome, complete genomephage holin2e-24110
NC_015968:3301958:330616233061623306503342Enterobacter asburiae LF7a chromosome, complete genomephage holin, lambda family6e-24109
NC_011094:638552:664203664203664547345Salmonella enterica subsp. enterica serovar Schwarzengrund strphage holin, lambda family protein6e-1992.8
NC_020063:2565605:257256325725632572904342Enterobacteriaceae bacterium strain FGI 57, complete genomephage holin, lambda family6e-1889.4
NC_012779:2184927:219484621948462195193348Edwardsiella ictaluri 93-146, complete genomephage holin, lambda family, putative4e-1683.2
NC_012779:1939747:194568519456851945984300Edwardsiella ictaluri 93-146, complete genomephage holin, lambda family, putative4e-1167