Pre_GI: BLASTP Hits

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Query: NC_003197:1611302:1619783 Salmonella typhimurium LT2, complete genome

Start: 1619783, End: 1621339, Length: 1557

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1575488:1577951157795115795071557Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1PhoPQ-regulated protein01075
NC_016860:1614280:1617473161747316190291557Salmonella enterica subsp. enterica serovar Typhimurium strPhoPQ-regulated protein01075
NC_016857:1576636:1576636157663615781921557Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74PhoPQ-regulated protein01075
NC_016810:1576636:1576636157663615781921557Salmonella enterica subsp. enterica serovar Typhimurium strPhoPQ-activated protein01075
NC_011094:1584038:1587231158723115887871557Salmonella enterica subsp. enterica serovar Schwarzengrund strPqaA protein01054
NC_003198:1463253:1473676147367614752321557Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein01045
NC_017046:1574057:1576520157652015780101491Salmonella enterica subsp. enterica serovar Typhimurium str. 798PhoPQ-activated protein01026
NC_016856:1621279:1629760162976016312501491Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SPhoPQ-regulated protein01026
NC_011149:1578451:1594162159416215956521491Salmonella enterica subsp. enterica serovar Agona str. SL483,PqaA protein01001
NC_010067:1414000:1435308143530814368041497Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0906
NC_015761:1488807:1497287149728714987771491Salmonella bongori NCTC 12419, complete genomehypothetical protein0812
NC_006351:101500:1072941072941087811488Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein3e-134479
NC_007435:1914375:1945748194574819472351488Burkholderia pseudomallei 1710b chromosome II, complete sequencehypothetical protein4e-134478
NC_009078:74954:1072641072641087151452Burkholderia pseudomallei 1106a chromosome II, complete sequencePqaA protein7e-134477
NC_003296:168506:1866991866991882521554Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSMEMBRANE PROTEIN8e-131467
NC_011978:1581994:1600719160071916019871269Thermotoga neapolitana DSM 4359, complete genomehypothetical protein3e-24113
NC_000853:960248:9613329613329626001269Thermotoga maritima MSB8, complete genomehypothetical protein3e-24113
NC_020054:2679676:2689404268940426907711368Fibrella aestuarina BUZ 2 drat genomeAutocrine proliferation repressor PhoPQ-activated pathogenicity-related protein4e-1790.1