Pre_GI: BLASTP Hits

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Query: NC_003063:304962:320665 Agrobacterium tumefaciens str. C58 chromosome linear, complete

Start: 320665, End: 321783, Length: 1119

Host Lineage: Agrobacterium fabrum; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain is a biovar 1 nopaline-producing strain originally isolated from a cherry tree tumor. Strains of Agrobacterium are classified in three biovars based on their utilisation of different carbohydrates and other biochemical tests. The differences between biovars are determined by genes on the single circle of chromosomal DNA. Biovar differences are not particularly relevant to the pathogenicity of A. tumefaciens, except in one respect: biovar 3 is found worldwide as the pathogen of gravevines. This species causes crown gall disease of a wide range of dicotyledonous (broad-leaved) plants, especially members of the rose family such as apple, pear, peach, cherry, almond, raspberry and roses. Because of the way that it infects other organisms, this bacterium has been used as a tool in plant breeding. Any desired genes, such as insecticidal toxin genes or herbicide-resistance genes, can be engineered into the bacterial DNA, and then inserted into the plant genome. This process shortens the conventional plant breeding process, and allows entirely new (non-plant) genes to be engineered into crops.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003305:1743939:1752975175297517540931119Agrobacterium tumefaciens str. C58 chromosome linear, completesugar acetylase2e-179628
NC_013665:231023:2441862441862453041119Methanocella paludicola SANAE, complete genomeputative acyltransferase2e-37156
NC_002678:6061448:6067060606706060681331074Mesorhizobium loti MAFF303099, complete genomeacetyltransferase3e-37155
NC_015563:6357653:6379307637930763803861080Delftia sp. Cs1-4 chromosome, complete genomeacyltransferase 38e-33141
NC_016641:834500:8504048504048515761173Paenibacillus terrae HPL-003 chromosome, complete genomeacyltransferase family protein1e-30134
NC_007705:755948:7672937672937683451053Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomeputative o-antigen acetylase1e-28127
NC_006834:787500:7989337989337999851053Xanthomonas oryzae pv. oryzae KACC10331, complete genomeputative o-antigen acetylase1e-28127
NC_010717:4626178:4635869463586946369211053Xanthomonas oryzae pv. oryzae PXO99A, complete genomeputative O-antigen acetylase1e-28127
NC_020541:625925:6376416376416387021062Rhodanobacter sp. 2APBS1, complete genomeputative acyltransferase2e-26120
NC_010002:960027:9600279600279611031077Delftia acidovorans SPH-1, complete genomeacyltransferase 31e-24114
NC_015563:5843703:5853556585355658545811026Delftia sp. Cs1-4 chromosome, complete genomeacyltransferase 34e-22105
NC_015563:5843703:5851553585155358526381086Delftia sp. Cs1-4 chromosome, complete genomeacyltransferase 32e-20100
NC_014363:645397:6518126518126528821071Olsenella uli DSM 7084 chromosome, complete genomeacyltransferase 36e-2099
NC_007347:767455:7960797960797972781200Ralstonia eutropha JMP134 chromosome 1, complete sequenceAcyltransferase 31e-1997.8
NC_014837:33014:3793237932389661035Pantoea sp. At-9b chromosome, complete genomeacyltransferase 33e-1996.7
NC_014618:2788533:2805572280557228066511080Enterobacter cloacae SCF1 chromosome, complete genomeacyltransferase 31e-1791.3
NC_017082:5844708:5852106585210658533711266Bradyrhizobium sp. S23321, complete genomeputative acetyltransferase4e-1686.3
NC_002678:763808:7837917837917850981308Mesorhizobium loti MAFF303099, complete genomeprobable acetyltransferase9e-1684.7
NC_007761:3564449:3566782356678235678911110Rhizobium etli CFN 42, complete genomeprobable acetyltransferase protein5e-1375.9
NC_017082:6444522:6461542646154264626781137Bradyrhizobium sp. S23321, complete genomeacyltransferase 38e-1375.1
NC_010397:1751067:1756975175697517579971023Mycobacterium abscessus chromosome Chromosome, complete sequencePutative acetyltransferase5e-1272.4
NC_014618:1752434:1774434177443417755371104Enterobacter cloacae SCF1 chromosome, complete genomeacyltransferase 32e-1170.1
NC_010397:4150596:4165631416563141667551125Mycobacterium abscessus chromosome Chromosome, complete sequenceAcetyltransferase1e-1067.8
NC_008596:421882:4396054396054406871083Mycobacterium smegmatis str. MC2 155, complete genomeputative acyltransferase1e-0964.7
NC_002944:1285436:1297579129757912989131335Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein1e-0964.7
NC_007951:769500:7748027748027759141113Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative acetyltransferase1e-0964.3
NC_010505:4820000:4856251485625148573421092Methylobacterium radiotolerans JCM 2831, complete genomeacyltransferase 35e-0962.4
NC_009348:1475955:1507875150787515089211047Aeromonas salmonicida subsp. salmonicida A449, complete genomeO-antigen acetylase1e-0861.2
NC_015578:247266:2832862832862843501065Treponema primitia ZAS-2 chromosome, complete genomeacyltransferase 32e-0860.1
NC_010397:4150596:4170012417001241711421131Mycobacterium abscessus chromosome Chromosome, complete sequenceProbable acetyltransferase AtfA3e-0859.7
NC_012982:711122:7554037554037565061104Hirschia baltica ATCC 49814, complete genomeacyltransferase 31e-0757.8
NC_013959:2892660:2900280290028029013471068Sideroxydans lithotrophicus ES-1 chromosome, complete genomeacyltransferase 31e-0757.4
NC_016604:5067562:5080946508094650821031158Mycobacterium rhodesiae NBB3 chromosome, complete genomeputative acyltransferase3e-0756.6
NC_002944:1285436:1290276129027612914721197Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein3e-0756.6
NC_008836:2780339:2789507278950727907451239Burkholderia mallei NCTC 10229 chromosome II, complete sequenceputative O-antigen acetylase9e-0755.1
NC_009080:1815768:1827479182747918287171239Burkholderia mallei NCTC 10247 chromosome II, complete sequenceputative O-antigen acetylase9e-0755.1
NC_013235:4618908:4636267463626746376701404Nakamurella multipartita DSM 44233, complete genomeacyltransferase 31e-0654.7
NC_009074:3029716:3041666304166630429041239Burkholderia pseudomallei 668 chromosome I, complete sequenceputative O-antigen acetylase WbiA1e-0654.7
NC_009076:3045139:3057090305709030583281239Burkholderia pseudomallei 1106a chromosome I, complete sequenceputative O-antigen acetylase WbiA1e-0654.7
NC_008785:914411:9235799235799248171239Burkholderia mallei SAVP1 chromosome II, complete sequenceputative O-antigen acetylase9e-0754.7
NC_007434:3452985:3465992346599234672301239Burkholderia pseudomallei 1710b chromosome I, complete sequenceO-antigen acetylase WbiA9e-0754.7
NC_006348:2071749:2082220208222020834581239Burkholderia mallei ATCC 23344 chromosome 1, complete sequenceO-antigen acetylase, putative9e-0754.7
NC_006350:3195165:3207116320711632083541239Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative O-antigen acetylase9e-0754.7
NC_007651:1662558:1670356167035616715941239Burkholderia thailandensis E264 chromosome I, complete sequenceacetyltransferase2e-0653.5